Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4644 150 2e-31
seq4863 136 4e-27
seq4810 129 7e-25
seq4765 98.7 1e-15
>seq4644
Length=1132839
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||| | | ||| | ||||| ||||| || |||||| ||||| |||||||||||
Sbjct 752534 CCTCCGCGCAGACGGAGCACCAAATGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAG 752475
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| |||| || ||||||||||||||||| ||||| |||||||| || | ||
Sbjct 752474 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGG 752415
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | |||||||||| |||||| ||| | || | | |||||| | |||||
Sbjct 752414 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACC 752355
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| |||||||| || || ||||| || || |||||||| ||||||
Sbjct 752354 TCCAAGGTGATGGTCTTTCCGGTCAGGGTCTTCACAAAGATCTGCATT 752307
Score = 138 bits (152), Expect = 1e-27
Identities = 147/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||||||||||||
Sbjct 751814 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 751755
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| |||||||| || | || | | |||||||||| |||||| ||| | |
Sbjct 751754 GATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 751695
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | ||||| | ||| || |||| |||||||| || || |||| ||||| ||
Sbjct 751694 CTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTTTCCAGTCAAGGTTTTCAC 751635
Query 46582 AAAGATTTGCATTT 46595
|||||| |||||||
Sbjct 751634 AAAGATCTGCATTT 751621
Score = 132 bits (146), Expect = 5e-26
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||||||||||||
Sbjct 752727 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 752668
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| |||||||| || | || | | ||||||||| ||| || ||| | |
Sbjct 752667 GATCAAACGCTGCTGATCTGGGGGTATTCCCTCCTTGTCTTGGATTTTGGCCTTCACATT 752608
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||| | ||||| |||| |||||||| || || ||||| || || ||
Sbjct 752607 CTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTCCAGTCAGGGTCTTCAC 752548
Query 46582 AAAGATTTGCATT 46594
|||||| ||||||
Sbjct 752547 AAAGATCTGCATT 752535
Score = 127 bits (140), Expect = 2e-24
Identities = 144/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || ||||||||||| |||||
Sbjct 752271 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCGAA 752212
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| |||||||| || | || | | |||||||||| |||||| ||| | |
Sbjct 752211 GATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 752152
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||| | ||||| |||| |||||||| || || || || || || ||
Sbjct 752151 CTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTCAC 752092
Query 46582 AAAGATTTGCATT 46594
||||| ||||||
Sbjct 752091 GAAGATCTGCATT 752079
Score = 113 bits (124), Expect = 5e-20
Identities = 142/194 (73%), Gaps = 1/194 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| | || || |||||||||||||||||
Sbjct 752043 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 751984
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| || | || | | |||||||||| |||||| ||| | |
Sbjct 751983 AATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 751924
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT-TTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| | ||||| |||| |||||||| ||| | || || || || |
Sbjct 751923 CTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTCCGAGTAAGAGTCTTCA 751864
Query 46581 CAAAGATTTGCATT 46594
||||||| ||||||
Sbjct 751863 CAAAGATCTGCATT 751850
>seq4863
Length=1240122
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| |||| || |||||| ||||| ||||||||||| |||||||| | || ||
Sbjct 1064088 CACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTC 1064029
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|||||||||||||| || |||| |||||||| || | || | || ||||||||||
Sbjct 1064028 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTG 1063969
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| || | | ||||| | ||||| |||| |||||||| ||
Sbjct 1063968 GATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTT 1063909
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || ||||| || ||||| |||||
Sbjct 1063908 GCCGGTGAGGGTTTTCACGAAGATCTGCAT 1063879
>seq4810
Length=1195048
Score = 129 bits (142), Expect = 7e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||| |||||| || |||||| ||||| ||||| ||||| | ||||| |
Sbjct 316975 ACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCC 316916
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || |||||||| ||||| || |||| ||||||||||| | || | || ||||||
Sbjct 316915 GTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTT 316856
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| || | | |||||| | || || || | |||||
Sbjct 316855 GTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGAT 316796
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| |||| || || || ||||| |||||
Sbjct 316795 GGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 316760
Score = 127 bits (140), Expect = 2e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| | | ||||| |||| || | || |||||| ||||| ||||| ||||
Sbjct 316532 TGCCTCCACGCAGACGCAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGG 316473
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || ||||| |||| || |||||||| ||||| || |||| ||||||||||| | |
Sbjct 316472 ACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGG 316413
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||||||| |||||| ||||| || | | |||||| | || |
Sbjct 316412 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATTGTGTCGGAGGGCTCGA 316353
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
| || | ||||| || ||||| |||| || || || ||||||||||| |||
Sbjct 316352 CCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTGACGAAGATTTGCATGTTG 316300
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
||||||| | | ||||| |||| || | || |||||| ||||| |||||||| |
Sbjct 316760 TGCCTCCGCGCAGACGCAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 316701
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| |||||||| | || || |||||||| ||||| || |||| ||||||||||| | |
Sbjct 316700 AGAGAGTGCGACCATCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGG 316641
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||||||| |||||| ||||| || | | || ||| | || |
Sbjct 316640 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTATCGGAGGGCTCGA 316581
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| ||||| |||| || || || ||||| |||||
Sbjct 316580 CCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 316532
>seq4765
Length=3541379
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| ||||| ||| |||||| || || || ||||| || || ||||| | || ||
Sbjct 2921417 CACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTC 2921476
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||||||||||| || || |||| |||||||| || | || | | || ||||||
Sbjct 2921477 CAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTG 2921536
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||| | | | ||||| || ||| || || | |||||||| ||
Sbjct 2921537 AATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATGGTCTT 2921596
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
|||||| || || || || ||||| ||||| |||
Sbjct 2921597 GCCCGTGAGGGTCTTCACGAAGATCTGCATCTTG 2921630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565202076367320
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