Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_014636.1
Length=225268
Score E
Sequences producing significant alignments: (Bits) Value
seq5094 91.5 2e-13
seq4953 84.2 3e-11
seq2670 84.2 3e-11
>seq5094
Length=366253
Score = 91.5 bits (100), Expect = 2e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 62900 CATAACTAGCGATATTAAACGCCAATCCAAGGAAGGTGTCAACACTTCGCTGATACCAAG 62959
||||||||||||| ||||||| | ||||||||| |||| |||| ||||||||| |
Sbjct 188568 CATAACTAGCGATGTTAAACGGAACTCCAAGGAAAATGTCGCCACTCCGCTGATACAACT 188509
Query 62960 TCAAATTCAGACGTCCAGCTTTCACACTGAATCGGAACAGAACGTGACACGGCGGCAGTG 63019
|| |||| ||| | || || ||| | |||| || |||||||| || ||||
Sbjct 188508 GGCAACTCAGTTTTCCGTCGTTAACGTAAAATTGAAACATTACATGACACGGAGGGAGTG 188449
Query 63020 CCATATGAGGCAAGTCAACCGGATTCCAAGCACTGACGATATTACGACGACATTCTGGAT 63079
||||| | ||| | |||||||| ||||| || || | || | | |||||||
Sbjct 188448 CCATACTTCCAATGTCTTCTGGATTCCAGGCACTTACAATCATTCGTCTTGAATCTGGAT 188389
Query 63080 TAGTCTTAAT 63089
|| |||||||
Sbjct 188388 TATTCTTAAT 188379
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 191865 TGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAACT 191924
|| |||||| || ||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 494 TGAGCCGTGGCGGGTTCGAACCGCCGACCCTCTGATTAAAAGTCAGATGCTCTACCAACT 435
Query 191925 AAGCTAACGGC 191935
||||||||||
Sbjct 434 GAGCTAACGGC 424
>seq4953
Length=802672
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 191865 TGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCAACT 191924
|| |||||| || ||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 309937 TGAGCCGTGGCGGGTTCGAACCGCCGACCCTCTGATTAAAAGTCAGATGCTCTACCAACT 309996
Query 191925 AAGCTAACGGC 191935
||||||||||
Sbjct 309997 GAGCTAACGGC 310007
>seq2670
Length=149592
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921
||||| |||| || ||||||||||| |||||| | ||||||||||| |||||||||||
Sbjct 133339 TGGTGAGCCGGGAGGGACTCGAACCCTCGACCATTCGATTAAAAGTCGAATGCTCTACCA 133280
Query 191922 ACTAAGCTAACGGC 191935
||| ||||| ||||
Sbjct 133279 ACTGAGCTACCGGC 133266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 720683284114080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |