Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq5094 196 2e-44
seq4765 89.7 2e-12
>seq5094
Length=366253
Score = 196 bits (216), Expect = 2e-44
Identities = 232/313 (74%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|||| | | ||||| ||||||||||| ||||| || |||||||| ||||| ||||| ||
Sbjct 124279 GTTAGTCAAGCAGTTATTACTGTTCCTGCTTACTTTAATGATGCTCAACGTCAAGCTACC 124338
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|||||||| || | ||||| || | ||||| ||||||||||||||||||| |||
Sbjct 124339 AAAGATGCCGGTAAAATTGCCGGACTTGATGTTAAAAGAATTATTAATGAACCTACTGCA 124398
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
||| | || |||||||| ||| || |||||| | ||| |||||| || |||||
Sbjct 124399 GCTTCACTTGCATATGGTTTAGATAA---AAAAGACAAAGATGAAAAA---ATCTTAGTT 124452
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
| |||||| |||||||| ||| |||| |||||| ||| | | | ||||| || ||
Sbjct 124453 TATGATTTAGGTGGAGGTACTTTTGATGTTTCTGTCCTTGAATTAGGGGATGGAGTCTTC 124512
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATT 451612
|||| |||| ||||||||||| || |||| || || ||| | ||||| |||
Sbjct 124513 CAAGTTCTTTCAACTAATGGTGATACCCACTTAGGTGGAGATGATTTCGATAAGAGAATC 124572
Query 451613 GTGGAATGGTTGA 451625
|||| |||||||
Sbjct 124573 ATGGACTGGTTGA 124585
>seq4765
Length=3541379
Score = 89.7 bits (98), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || || |||||||| || ||| | ||
Sbjct 2921626 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAACCGTCG 2921567
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | ||| || ||||| || || |||||||||||||| |||||
Sbjct 2921566 GACACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 2921507
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | || || | || || || || |||||||| | || | | || |||||
Sbjct 2921506 CAGCGTCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 2921447
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | ||||| | || | ||||| ||
Sbjct 2921446 ATTCAGAAGGAGTCTACCTTGCACTTGGT 2921418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975588261281228
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |