Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq4198 114 2e-20
>seq4198
Length=487851
Score = 114 bits (126), Expect = 2e-20
Identities = 275/407 (68%), Gaps = 12/407 (3%)
Strand=Plus/Plus
Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031
||||||||||||||||| || | |||||| | || || || || |||||||| ||
Sbjct 57870 TCAAAACCATCCATCTCAACCAGCATCTGGTTCAGTGTCTGCTCGCGCTCATCATT-GCC 57928
Query 16032 GGCATACC-ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090
| || | ||| |||| || || || ||||||||||| ||||||||||||| ||
Sbjct 57929 GCCACCCATACCTGCACCACGATGGCGACCAACGGCATCAATTTCATCAATGAAGATAAT 57988
Query 16091 GCATG--GTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148
||| | | ||||||| | | ||| || | || || ||||| || || |||
Sbjct 57989 GCAAGGAGCTGATTTT--TTACCCTGTTCGAACATGTCACGCACACGGGATGCACCAACA 58046
Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207
|| || ||||| |||||||||| | | | | || | | ||| || ||||| | |||
Sbjct 58047 CCTACGAACATTTCCACAAAGTCGGAACCAG-AGATGGTAAAGAACGGTACATTGGCTTC 58105
Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267
||| |||||||| ||||| | || || ||||| || || ||| ||| | || || |
Sbjct 58106 ACCTGCAATGGCGCGGGCCAACAGGGTTTTACCAGTGCCCGGCGGCCCCACAAGCAGCAC 58165
Query 16268 ACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCC 16325
||| ||||| || |||| | | || | ||| || | || |||||||||
Sbjct 58166 GCCTTTGGGAATTTTACCGCCCAAGCGCGTAA--ACTTCTGTGGGTCTTTCAGAAAATCC 58223
Query 16326 ACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372
|| || || | | ||| |||| || | |||||||| | |||||
Sbjct 58224 ACGATTTCCTGAAGTTCCCCTTTAGCTTCATCAATCCCGGCTACATC 58270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620702509541520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |