Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4198 114 2e-20 >seq4198 Length=487851 Score = 114 bits (126), Expect = 2e-20 Identities = 275/407 (68%), Gaps = 12/407 (3%) Strand=Plus/Plus Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031 ||||||||||||||||| || | |||||| | || || || || |||||||| || Sbjct 57870 TCAAAACCATCCATCTCAACCAGCATCTGGTTCAGTGTCTGCTCGCGCTCATCATT-GCC 57928 Query 16032 GGCATACC-ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 | || | ||| |||| || || || ||||||||||| ||||||||||||| || Sbjct 57929 GCCACCCATACCTGCACCACGATGGCGACCAACGGCATCAATTTCATCAATGAAGATAAT 57988 Query 16091 GCATG--GTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 16148 ||| | | ||||||| | | ||| || | || || ||||| || || ||| Sbjct 57989 GCAAGGAGCTGATTTT--TTACCCTGTTCGAACATGTCACGCACACGGGATGCACCAACA 58046 Query 16149 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 16207 || || ||||| |||||||||| | | | | || | | ||| || ||||| | ||| Sbjct 58047 CCTACGAACATTTCCACAAAGTCGGAACCAG-AGATGGTAAAGAACGGTACATTGGCTTC 58105 Query 16208 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGC 16267 ||| |||||||| ||||| | || || ||||| || || ||| ||| | || || | Sbjct 58106 ACCTGCAATGGCGCGGGCCAACAGGGTTTTACCAGTGCCCGGCGGCCCCACAAGCAGCAC 58165 Query 16268 ACCTCGTGGAATCTTGGCGCC--ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCC 16325 ||| ||||| || |||| | | || | ||| || | || ||||||||| Sbjct 58166 GCCTTTGGGAATTTTACCGCCCAAGCGCGTAA--ACTTCTGTGGGTCTTTCAGAAAATCC 58223 Query 16326 ACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 || || || | | ||| |||| || | |||||||| | ||||| Sbjct 58224 ACGATTTCCTGAAGTTCCCCTTTAGCTTCATCAATCCCGGCTACATC 58270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620702509541520