Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_015253.1 Length=127065 Score E Sequences producing significant alignments: (Bits) Value seq4953 145 6e-30 >seq4953 Length=802672 Score = 145 bits (160), Expect = 6e-30 Identities = 284/418 (68%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 82961 CAGAGAAATGGTGCAGGAGCGGTATACCTAAACGTATTCCACCCAGATATTATTAACTTT 83020 || ||||| ||||| || | || || || | || ||||| || || || ||| | || Sbjct 185552 CAAAGAAACGGTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTC 185611 Query 83021 TTAGCAACAAAGAAAGAGAACGCAGATGAAAAAGTACGCATCAAGACATTGTCAATGGGC 83080 || | | || || || ||||| || |||||| | || | || || | ||| | || Sbjct 185612 TTGGGAGTTAAAAAGGAAAACGCCGACGAAAAAATCCGAGTAAACACCCTTTCACTTGGT 185671 Query 83081 TTAATATTGCCTGATAAGTTTTACGAGCTAGTAGGAAACGATGACTATATGTACTTATTC 83140 | | |||| ||||| ||||| ||||| | ||| ||||| |||||||| ||||| Sbjct 185672 GTGGTTGTGCCAGATAAATTTTATGAGCTCGCTAAAAATGATGATGATATGTACCTATTC 185731 Query 83141 AGCCCTTACGATGTTGAAAGAGAGTATGGTAAGCCCTTCTCTTACATTAACATCACGGAA 83200 || || || ||||||||| | |||||||| |||||||| || || | || | || Sbjct 185732 AGTCCATATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCTAAA 185791 Query 83201 GAATACGATAACCTAGTAGAAAATAAGAGTATTACTAAGTCACGTATTAAGGCACGTCAA 83260 |||||||| || | || | || |||| ||| ||||| | ||| || ||| || Sbjct 185792 GAATACGACAATATGGTCAAGAACAAGAACATTTCTAAGAAAAAGATTCGAGCTCGTGAA 185851 Query 83261 TT--AAACGACGAGATATCTAAGCTACAGCAAGAAGCAGGCTATCCATATATCATTAACG 83318 | |||| ||| || || ||||| |||||| | ||||||||||| || || ||| Sbjct 185852 CTTGAAAC--CGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATCAACA 185909 Query 83319 AAGACACAGTCAACCTAGCTAACGCAGGTGACGGTAAGGTGATTATGAGCAACCTCTG 83376 ||||| || |||| | ||| | | |||||| ||| | | ||||| || || || Sbjct 185910 TTGACACCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTGTG 185967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406457731414026