Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_015253.1
Length=127065
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 145 6e-30
>seq4953
Length=802672
Score = 145 bits (160), Expect = 6e-30
Identities = 284/418 (68%), Gaps = 4/418 (1%)
Strand=Plus/Plus
Query 82961 CAGAGAAATGGTGCAGGAGCGGTATACCTAAACGTATTCCACCCAGATATTATTAACTTT 83020
|| ||||| ||||| || | || || || | || ||||| || || || ||| | ||
Sbjct 185552 CAAAGAAACGGTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTC 185611
Query 83021 TTAGCAACAAAGAAAGAGAACGCAGATGAAAAAGTACGCATCAAGACATTGTCAATGGGC 83080
|| | | || || || ||||| || |||||| | || | || || | ||| | ||
Sbjct 185612 TTGGGAGTTAAAAAGGAAAACGCCGACGAAAAAATCCGAGTAAACACCCTTTCACTTGGT 185671
Query 83081 TTAATATTGCCTGATAAGTTTTACGAGCTAGTAGGAAACGATGACTATATGTACTTATTC 83140
| | |||| ||||| ||||| ||||| | ||| ||||| |||||||| |||||
Sbjct 185672 GTGGTTGTGCCAGATAAATTTTATGAGCTCGCTAAAAATGATGATGATATGTACCTATTC 185731
Query 83141 AGCCCTTACGATGTTGAAAGAGAGTATGGTAAGCCCTTCTCTTACATTAACATCACGGAA 83200
|| || || ||||||||| | |||||||| |||||||| || || | || | ||
Sbjct 185732 AGTCCATATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCTAAA 185791
Query 83201 GAATACGATAACCTAGTAGAAAATAAGAGTATTACTAAGTCACGTATTAAGGCACGTCAA 83260
|||||||| || | || | || |||| ||| ||||| | ||| || ||| ||
Sbjct 185792 GAATACGACAATATGGTCAAGAACAAGAACATTTCTAAGAAAAAGATTCGAGCTCGTGAA 185851
Query 83261 TT--AAACGACGAGATATCTAAGCTACAGCAAGAAGCAGGCTATCCATATATCATTAACG 83318
| |||| ||| || || ||||| |||||| | ||||||||||| || || |||
Sbjct 185852 CTTGAAAC--CGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATCAACA 185909
Query 83319 AAGACACAGTCAACCTAGCTAACGCAGGTGACGGTAAGGTGATTATGAGCAACCTCTG 83376
||||| || |||| | ||| | | |||||| ||| | | ||||| || || ||
Sbjct 185910 TTGACACCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTGTG 185967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406457731414026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |