Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_015274.1
Length=56506
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 89.7 2e-13
>seq4953
Length=802672
Score = 89.7 bits (98), Expect = 2e-13
Identities = 182/268 (68%), Gaps = 8/268 (3%)
Strand=Plus/Minus
Query 10413 ATTGAAATTGATGCTGCTTCTAATAATGGGGTAGAAAATGTTCGAAACATTATTGAAGAT 10472
|||||||||||||| || || ||||| || || ||| | || |||| ||| ||| |
Sbjct 182745 ATTGAAATTGATGCCGCCTCCAATAACGGAGTTGAAGAGATTAGAAATATTCGTGATAAG 182686
Query 10473 TCTAGATACAAGTCTATGGACAGCGAGTTCAAAGTTTACATCATTGACGAGGTTCATATG 10532
| | || | | || | ||| || || || |||||||| || |||||||||
Sbjct 182685 GCCAAGTATGCTCCCACCGAAGGGAAGTATAAGGTCTATATCATTGATGAAGTTCATATG 182626
Query 10533 CTTTCAACCGGAGCATTTAATGCGCTGTTGAAAACATTAGAAGAGCCCTCATCGGGAAC- 10591
| ||||| || || ||||| || || | |||||||||||||| || || ||||
Sbjct 182625 TTATCAACGGGGGCTTTTAACGCCCTTCTTAAAACATTAGAAGAACCACCA----GAACA 182570
Query 10592 CGTG---TTCATTCTATGTACTACTGACCCTCAAAAGATTCCTGACACTATTCTCAGTCG 10648
|||| || ||| || || ||||| || ||||||||||| | || ||| | ||
Sbjct 182569 CGTGATTTTTATTTTAGCGACCACTGAACCACAAAAGATTCCGGCTACCATTATTTCACG 182510
Query 10649 AGTTCAACGGTTTGACTTTACTCGAATT 10676
|| |||||||| |||| || |||
Sbjct 182509 GACACAGCGGTTTGATTTTAAGCGGATT 182482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180686568524456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |