Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2670 123 3e-23 >seq2670 Length=149592 Score = 123 bits (136), Expect = 3e-23 Identities = 338/518 (65%), Gaps = 0/518 (0%) Strand=Plus/Plus Query 154587 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 154646 || ||| | |||| ||| | || | |||| || | || || |||||||| | || | Sbjct 142020 AAGTGGCTGTGTGCTATTAGCGGTTATGATGCTGTTTCCTTCCAACCTAATTCTGGCGCG 142079 Query 154647 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 154706 ||||| || |||||||| || | | || | || || ||||| || || || | Sbjct 142080 CAGGGGGAATATGCAGGTTTGCTTGTTATTCGTGCGTATCATCAGGGGCGTGGGGAAGGG 142139 Query 154707 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTC 154766 | | | || ||||| || || | || || ||||| || || || ||| ||| Sbjct 142140 CATCGGACAGTTTGTTTAATTCCGGCTTCTGCGCATGGTACCAACCCAGCTTCTGCCCAA 142199 Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAA 154826 ||||| || ||||| ||||| | || |||||||||| | || ||||| || | || Sbjct 142200 ATGGCGGGCATGAAGGTTGTGGTGGTAAAGTGTGATGCAGGCGGCAACATTGATCTGGAA 142259 Query 154827 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAC 154886 || | ||||| || | || | ||| ||| | | |||||||| || Sbjct 142260 GACATGCGTGAGAAAATAAAGGCGCATGCGAATGATCTGGCCGCAGTGATGATTACTTAT 142319 Query 154887 CCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGAC 154946 || || || ||||| || |||||| ||||| | | || ||| | | || || Sbjct 142320 CCTTCCACTCATGGCGTGTTTGAAGAAAACATGCGTGAAATCTGTGATCTGGTGCACTCA 142379 Query 154947 AATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAA 155006 ||||| ||||||||| | ||||| || || | ||||| ||||| || || ||| Sbjct 142380 GCCGGTGGGCAGGTATATGTGGATGGCGCCAACATGAATGCTCAGGTTGGGCTTGCACGC 142439 Query 155007 CCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 || || || |||| ||||| |||| | ||| | |||||||| ||||| |||||| Sbjct 142440 CCGGCAGACTACGGTGGGGATGTTAGTCACTTTAACCTGCATAAAACTTTCTGCATTCCA 142499 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| || || || || || | || || || ||||| Sbjct 142500 CATGGTGGCGGTGGCCCGGGTATGGGGCCAATTGGTGT 142537 Score = 104 bits (114), Expect = 3e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 153204 CTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTT 153263 || || || ||||| || || || || | ||| | || || ||||| || |||| Sbjct 140616 CTGATCGGGCAAGGGTATTACGGTACGGTGCTGCCCGCTGTTATCCAGCGGAATATTCTG 140675 Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 || ||||| |||||||||| ||||||| || ||||| | || || || || | Sbjct 140676 GAAAATCCGGCTTGGTACACAGCTTACACGCCGTATCAGCCAGAAATCAGCCAAGGGCGT 140735 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 ||||||| | || || | |||||| | || ||||| || ||||| || || || Sbjct 140736 CTGGAAGCCCTGTTGAACTTCCAAACCATGATTACAGAGCTGACAGGGTTGGATATCGCC 140795 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| | ||||| ||||||||||||| ||||| |||||||| ||| Sbjct 140796 AACTCTTCTCTGCTAGATGAAGCAACAGCAGCGGCAGAAGCCATG 140840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579175578337440