Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 123 3e-23
>seq2670
Length=149592
Score = 123 bits (136), Expect = 3e-23
Identities = 338/518 (65%), Gaps = 0/518 (0%)
Strand=Plus/Plus
Query 154587 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 154646
|| ||| | |||| ||| | || | |||| || | || || |||||||| | || |
Sbjct 142020 AAGTGGCTGTGTGCTATTAGCGGTTATGATGCTGTTTCCTTCCAACCTAATTCTGGCGCG 142079
Query 154647 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 154706
||||| || |||||||| || | | || | || || ||||| || || || |
Sbjct 142080 CAGGGGGAATATGCAGGTTTGCTTGTTATTCGTGCGTATCATCAGGGGCGTGGGGAAGGG 142139
Query 154707 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTC 154766
| | | || ||||| || || | || || ||||| || || || ||| |||
Sbjct 142140 CATCGGACAGTTTGTTTAATTCCGGCTTCTGCGCATGGTACCAACCCAGCTTCTGCCCAA 142199
Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAA 154826
||||| || ||||| ||||| | || |||||||||| | || ||||| || | ||
Sbjct 142200 ATGGCGGGCATGAAGGTTGTGGTGGTAAAGTGTGATGCAGGCGGCAACATTGATCTGGAA 142259
Query 154827 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAC 154886
|| | ||||| || | || | ||| ||| | | |||||||| ||
Sbjct 142260 GACATGCGTGAGAAAATAAAGGCGCATGCGAATGATCTGGCCGCAGTGATGATTACTTAT 142319
Query 154887 CCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGAC 154946
|| || || ||||| || |||||| ||||| | | || ||| | | || ||
Sbjct 142320 CCTTCCACTCATGGCGTGTTTGAAGAAAACATGCGTGAAATCTGTGATCTGGTGCACTCA 142379
Query 154947 AATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAA 155006
||||| ||||||||| | ||||| || || | ||||| ||||| || || |||
Sbjct 142380 GCCGGTGGGCAGGTATATGTGGATGGCGCCAACATGAATGCTCAGGTTGGGCTTGCACGC 142439
Query 155007 CCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066
|| || || |||| ||||| |||| | ||| | |||||||| ||||| ||||||
Sbjct 142440 CCGGCAGACTACGGTGGGGATGTTAGTCACTTTAACCTGCATAAAACTTTCTGCATTCCA 142499
Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
||||| || || || || || | || || || |||||
Sbjct 142500 CATGGTGGCGGTGGCCCGGGTATGGGGCCAATTGGTGT 142537
Score = 104 bits (114), Expect = 3e-17
Identities = 158/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 153204 CTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTT 153263
|| || || ||||| || || || || | ||| | || || ||||| || ||||
Sbjct 140616 CTGATCGGGCAAGGGTATTACGGTACGGTGCTGCCCGCTGTTATCCAGCGGAATATTCTG 140675
Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
|| ||||| |||||||||| ||||||| || ||||| | || || || || |
Sbjct 140676 GAAAATCCGGCTTGGTACACAGCTTACACGCCGTATCAGCCAGAAATCAGCCAAGGGCGT 140735
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
||||||| | || || | |||||| | || ||||| || ||||| || || ||
Sbjct 140736 CTGGAAGCCCTGTTGAACTTCCAAACCATGATTACAGAGCTGACAGGGTTGGATATCGCC 140795
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
||| | ||||| ||||||||||||| ||||| |||||||| |||
Sbjct 140796 AACTCTTCTCTGCTAGATGAAGCAACAGCAGCGGCAGAAGCCATG 140840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579175578337440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |