Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 145 9e-30
>seq2670
Length=149592
Score = 145 bits (160), Expect = 9e-30
Identities = 345/519 (66%), Gaps = 2/519 (0%)
Strand=Plus/Plus
Query 159262 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 159321
|| ||| | |||| ||| | || | |||| || | || || |||||||| | || |
Sbjct 142020 AAGTGGCTGTGTGCTATTAGCGGTTATGATGCTGTTTCCTTCCAACCTAATTCTGGCGCG 142079
Query 159322 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 159381
||||| || |||||||| || | | || | || || ||||| || || || |
Sbjct 142080 CAGGGGGAATATGCAGGTTTGCTTGTTATTCGTGCGTATCATCAGGGGCGTGGGGAAGGG 142139
Query 159382 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTG 159441
| | | || ||||| || || | || || ||||| || || || || || ||
Sbjct 142140 CATCGGACAGTTTGTTTAATTCCGGCTTCTGCGCATGGTACCAACCCAGCTTCTGCCCAA 142199
Query 159442 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAA 159501
||||| || ||||| ||||| | || |||||||||| | |||||||| || | ||
Sbjct 142200 ATGGCGGGCATGAAGGTTGTGGTGGTAAAGTGTGATGCAGGCGGCAACATTGATCTGGAA 142259
Query 159502 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAT 159561
|| | ||||| || | || | ||| ||| | | |||||||| |||
Sbjct 142260 GACATGCGTGAGAAAATAAAGGCGCATGCGAATGATCTGGCCGCAGTGATGATTACTTAT 142319
Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCA-TGA 159620
|| || || ||||| || |||||| |||||| | | || ||| | | || || | |
Sbjct 142320 CCTTCCACTCATGGCGTGTTTGAAGAAAACATGCGTGAAATCTGTGATCTGGTGCACTCA 142379
Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680
| ||||| ||||||||| | ||||| || || | ||||| ||||| || || |||
Sbjct 142380 GCC-GGTGGGCAGGTATATGTGGATGGCGCCAACATGAATGCTCAGGTTGGGCTTGCACG 142438
Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740
|| ||||| |||| ||||| |||| | ||| | ||||| || ||||| |||||
Sbjct 142439 CCCGGCAGACTACGGTGGGGATGTTAGTCACTTTAACCTGCATAAAACTTTCTGCATTCC 142498
Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||||| || || || || || | || || ||||||||
Sbjct 142499 ACATGGTGGCGGTGGCCCGGGTATGGGGCCAATTGGTGT 142537
Score = 100 bits (110), Expect = 3e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 157879 CTTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTT 157938
|| || || ||||| || || || || | ||| | || || ||||| || ||||
Sbjct 140616 CTGATCGGGCAAGGGTATTACGGTACGGTGCTGCCCGCTGTTATCCAGCGGAATATTCTG 140675
Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
|| ||||| |||||||||| ||||||| || ||||| | || || || || |
Sbjct 140676 GAAAATCCGGCTTGGTACACAGCTTACACGCCGTATCAGCCAGAAATCAGCCAAGGGCGT 140735
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
||||||| | || || | |||||| | || ||||| || ||||| | || ||
Sbjct 140736 CTGGAAGCCCTGTTGAACTTCCAAACCATGATTACAGAGCTGACAGGGTTGGATATCGCC 140795
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGC 158111
||| | ||||| ||||||||||||| ||||| |||||||| ||| ||| ||
Sbjct 140796 AACTCTTCTCTGCTAGATGAAGCAACAGCAGCGGCAGAAGCCATGGCGTTGGC 140848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588013410359760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |