Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq4968 84.2 3e-11 >seq4968 Length=441983 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 216657 GTGTGGTGGAATCGGTAGACACACCAGACTTAAAATCTGTTGACAGCAATGTCGTGGGGG 216716 |||||||||||| ||||||||| ||||| ||| |||| |||| |||| |||||||||| Sbjct 390454 GTGTGGTGGAATTGGTAGACACGCCAGATTTAGGTTCTGGTGAC-GCAA-GTCGTGGGGG 390511 Query 216717 TTCAAGTCCCCCCAC 216731 |||||||||| |||| Sbjct 390512 TTCAAGTCCCTCCAC 390526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745033719193680