Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4810 154 3e-32
seq4863 138 3e-27
seq4644 138 3e-27
seq4765 122 2e-22
>seq4810
Length=1195048
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| | |||||| |||||||| || || || |||||||||| || || | || ||
Sbjct 316516 CAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTC 316457
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| |||||||| || || ||||| || || || |||||||| |||||||| || |||||
Sbjct 316456 CTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 316397
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|| || || |||||||||||| || ||||| || || || |||||||| | ||
Sbjct 316396 CTGGATCTTGGCCTTGACGTTCTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTGATAGT 316337
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || |||||||| || ||||| | ||||||
Sbjct 316336 CTTGCCGGTCAAAGTCTTGACGAAGATTTGCAT 316304
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| | |||||| || ||||| || || || ||||| || | ||||| | |||||
Sbjct 316744 CAGAACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATC 316685
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| |||||||| || || ||||| || || || |||||||| |||||||| || |||||
Sbjct 316684 CTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 316625
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|| || || |||||||||||||||||| || || || || |||||||| | ||
Sbjct 316624 CTGGATCTTGGCCTTGACGTTCTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGT 316565
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || |||||||| || ||||| | |||||
Sbjct 316564 CTTGCCGGTCAAAGTCTTGACGAAGATCTGCAT 316532
Score = 145 bits (160), Expect = 2e-29
Identities = 153/199 (77%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTGCTTAC 195001
||||||||| || || || |||||||||| |||| || | || || || |||||||| |
Sbjct 316957 AGTGGACTCCTTCTGGATGTTGTAATCGGACAAG-GTGCGTCCGTCCTCCAGCTGCTTTC 316899
Query 195002 CTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCT 195061
| || ||||| || || || |||||||| |||||||| || ||||| || || || ||
Sbjct 316898 CGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCT 316839
Query 195062 TGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAG 195121
|||||||||| |||||||| || || || |||||||| | ||||| || |||||||
Sbjct 316838 TGACGTTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAAG 316779
Query 195122 TTTTTACGAACACTTGCAT 195140
| || ||||| | |||||
Sbjct 316778 TCTTGACGAAGATCTGCAT 316760
>seq4863
Length=1240122
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || || ||||| || || || ||||| |||| ||||| | ||||| || |||||
Sbjct 1064082 GTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCAGCTG 1064023
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| || || || || ||||| |||||||| || ||||| || || ||
Sbjct 1064022 CTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTT 1063963
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| ||||| |||||||||||| ||||| || ||||| | ||||| || ||
Sbjct 1063962 GGCCTTGACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGT 1063903
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||||| ||||| | |||||
Sbjct 1063902 GAGGGTTTTCACGAAGATCTGCAT 1063879
>seq4644
Length=1132839
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| |||| || || | || || || |||||
Sbjct 751826 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTG 751767
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || || || |||||||| || || || ||||| || || ||
Sbjct 751766 CTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTT 751707
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || |||||||||||||||||| ||| || || | ||| | |||||||| ||
Sbjct 751706 GGCCTTCACATTCTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTTTCCAGT 751647
Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142
||| ||||| || || | |||||||
Sbjct 751646 CAAGGTTTTCACAAAGATCTGCATTT 751621
Score = 127 bits (140), Expect = 5e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || |||||||| || || || ||||| |||| || || | || ||||| |||||
Sbjct 752283 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCCAGCTG 752224
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || || || |||||||| || || || ||||| || || ||
Sbjct 752223 CTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTT 752164
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || |||||||||||||| || ||||| || | ||| | |||||||| ||
Sbjct 752163 GGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTCCGGT 752104
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| ||| || ||||| | ||||||
Sbjct 752103 AAGAGTCTTCACGAAGATCTGCATT 752079
Score = 127 bits (140), Expect = 5e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || || || ||||| |||| || || | || || || |||||
Sbjct 752739 GTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTG 752680
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || || || ||||| || || || || |||||||| |||||
Sbjct 752679 CTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGTATTCCCTCCTTGTCTTGGATTTT 752620
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || |||||||||||||| || |||||||| || || | |||||||| ||
Sbjct 752619 GGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTCCAGT 752560
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
|| || || || || | ||||||
Sbjct 752559 CAGGGTCTTCACAAAGATCTGCATT 752535
Score = 116 bits (128), Expect = 8e-21
Identities = 150/206 (73%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || || || ||||| || | || || | ||||| || |||||
Sbjct 752055 GTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCCTCCAGCTG 751996
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || ||||| || || || || || |||||||| || || || ||||| || || ||
Sbjct 751995 CTTGCCGGCGAAAATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTT 751936
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC-TG 195115
||| || |||||||||||||| || |||||||| || || | |||||||| |
Sbjct 751935 GGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTCCGAG 751876
Query 195116 TCAAAGTTTTTACGAACACTTGCATT 195141
| | ||| || || || | ||||||
Sbjct 751875 TAAGAGTCTTCACAAAGATCTGCATT 751850
Score = 111 bits (122), Expect = 3e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || ||||| || || || ||||| |||| || || | || || || ||||||
Sbjct 752510 TGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTCCAGCTGC 752451
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || |||||||| | || || || |||||||| || || || ||||| || || ||
Sbjct 752450 TTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGATCTTG 752391
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || |||||||||||||| || ||||| || | ||| | |||||||| |||
Sbjct 752390 GCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTCCGGTC 752331
Query 195118 AAAGTTTTTACGAACACTTGCATT 195141
| || || || || | ||||||
Sbjct 752330 AGGGTCTTCACAAAGATCTGCATT 752307
>seq4765
Length=3541379
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| ||||| || ||||| || || || | || || | |||||||| |||||||| ||
Sbjct 2921430 GTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2921489
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| || || || || ||||||||||| ||||||||||| ||||| || |||
Sbjct 2921490 GCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 2921549
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || |||||||| ||| || ||||| || | ||||| || || | ||
Sbjct 2921550 ACATTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTC 2921609
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | |||||
Sbjct 2921610 TTCACGAAGATCTGCAT 2921626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109408519487147
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