Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq5094 91.5 2e-13 >seq5094 Length=366253 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 149445 TATTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTC 149504 ||| ||||||||||||||||||||||||| || | ||||||| | | || ||| |||||| Sbjct 1274 TATCGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTC 1333 Query 149505 AAATCCACCTCCCGC 149519 ||||||| ||||||| Sbjct 1334 AAATCCAGCTCCCGC 1348 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 149445 TATTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTC 149504 ||| ||||||||||||||||||||||||| || | ||||||| | | || ||| |||||| Sbjct 1891 TATCGCGGGATAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTC 1950 Query 149505 AAATCCACCTCCCGC 149519 ||||||| ||||||| Sbjct 1951 AAATCCAGCTCCCGC 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571236888530280