Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq4968 91.5 3e-13 >seq4968 Length=441983 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 16121 TGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTATCC 16180 ||||||||||| | ||||||||||| | |||| | ||||||||||||| |||||||||| Sbjct 267865 TGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTATCC 267806 Query 16181 -ACTGAGCTAAGAGCGC 16196 ||||||||||| |||| Sbjct 267805 AACTGAGCTAAGGGCGC 267789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 911035850796120