Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq261 107 3e-18
>seq261
Length=229512
Score = 107 bits (118), Expect = 3e-18
Identities = 192/277 (69%), Gaps = 10/277 (4%)
Strand=Plus/Plus
Query 22951 CGGTCGGCGTAGGAAACTTCGCACT--CTTCATCAGATTCAAAGAACAGAATTTGTGCGC 23008
|| || |||||| ||||||||| ||| ||| | ||||||||||| || ||
Sbjct 73799 CGATCTGCGTAGCTTACTTCGCACGGGCTT--TCACCCTTAAAGAACAGAAACTG---GC 73853
Query 23009 AA---CCTTCGCCAGCGTAGATCAGTGCCGGGCTTGGTGTGGTATTGGAAAACTCCAGAG 23065
|| ||||| || || || |||| || || ||||| ||| | ||| | |
Sbjct 73854 AAATGCCTTCATTGGCATAAATGCGTGCAGGCAACGGCGTGGTGTTGCTGATCTCGATCG 73913
Query 23066 TAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCG 23125
| | | |||| |||||||||||| | || |||||||| ||||| |||||||| ||||
Sbjct 73914 TTACCTGTCCTTCCCATTCTGGTTCTAAAGGGGTGACGTTGACGATAATGCCGCAGCGCG 73973
Query 23126 CATACGTCGATTTGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCG 23185
|||| || ||||| || | ||| | || | ||| |||||||| || ||||| |||
Sbjct 73974 CATAGGTGGATTTACCCAAGCATACTACCAGTACATCACGCGGGATACGGAAGTATTCAA 74033
Query 23186 GCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGAT 23222
||| | ||||| | || ||||| |||||||| ||
Sbjct 74034 TCGTATGGGCCAGCACAAAGCTGTTGGGCGGAATAAT 74070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897535918391280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |