Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq4648 107 3e-18 >seq4648 Length=1580111 Score = 107 bits (118), Expect = 3e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 197088 GTAACAGGCGAGTAAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGC 197146 ||| ||||| || | |||||| |||||||| || ||||| ||| || ||| ||| Sbjct 367079 GTAGCAGGCAAGCA-GAAAGCCTCCGTAGGTGCCTGTTCTGCGGCCCTTGCCTTTGTAGC 367021 Query 197147 CTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAGTT 197206 | || || || |||| ||||||| ||||| ||| |||||||| |||||||| | Sbjct 367020 CGCCAATGACAACCAAGTCCAGAGAGTCGCCCACGTTGGAGATGTAATCCTTCTTCAGCT 366961 Query 197207 TGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGA 197266 | ||||| | | ||||||||||| ||||||||||| || | | |||| ||||| | Sbjct 366960 TTAGCCAATTACGCGATCTCTTGGCTATCTCGTAGGTGGCTTCCTCATCCAAAGTCTTCA 366901 Query 197267 TCATCAATCCCTCGCA 197282 ||| || |||||||| Sbjct 366900 CCATTAAACCCTCGCA 366885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676686111664080