Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq4583 109 1e-19 >seq4583 Length=779074 Score = 109 bits (120), Expect = 1e-19 Identities = 177/254 (70%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 5211 CTGCGCCTCGCAATGCTGCAGGCTCAGCTGGCACGCTTCCCGGCTTCCGGCCACGTCCTG 5270 ||||| || || ||| ||||| | ||||||| | |||||| | || ||| | ||| Sbjct 71925 CTGCGGCTGGCTATGTTGCAGACCACGCTGGCAGAATACCCGGCAACAGGGCACATTCTG 71984 Query 5271 CACTTCATCGACTGGGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCCTG 5330 || | |||||||| | |||||||| ||||| ||| || |||| ||| | | Sbjct 71985 AACCCAACTGACTGGGCCAGCATTGAACTGACCAAGGACGGTGTGAGCCGGTATGTGTTC 72044 Query 5331 GCGAACCCAGCGGCCCTGACTGGCCCTACCCTTTGGGGCCTGCCGGTGGTAGCAACCGAA 5390 || || || || | || ||||||| || ||||||||||| || | | | | Sbjct 72045 GCCAATCCTATGGGCATGGCTGGCCCGGTTCTGTGGGGCCTGCCTGTAGCTGAATCTCTG 72104 Query 5391 GCCGCAGCATTCCAGGGCAAGTTCCTGACCGGTGCATTCAACGCTGCGGCACAGCTGTTT 5450 ||| || |||||||||||| ||||||| || |||| | |||||| ||||||||| Sbjct 72105 GCCATGGCG---CAGGGCAAGTTCATGACCGGGGCCTTCAGCCTTGCGGCGCAGCTGTTT 72161 Query 5451 GACCGTGAAGACGC 5464 |||||||| ||||| Sbjct 72162 GACCGTGAGGACGC 72175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120175062939594