Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 109 1e-19
>seq4583
Length=779074
Score = 109 bits (120), Expect = 1e-19
Identities = 177/254 (70%), Gaps = 3/254 (1%)
Strand=Plus/Plus
Query 5211 CTGCGCCTCGCAATGCTGCAGGCTCAGCTGGCACGCTTCCCGGCTTCCGGCCACGTCCTG 5270
||||| || || ||| ||||| | ||||||| | |||||| | || ||| | |||
Sbjct 71925 CTGCGGCTGGCTATGTTGCAGACCACGCTGGCAGAATACCCGGCAACAGGGCACATTCTG 71984
Query 5271 CACTTCATCGACTGGGCGAAGATTGAACTCACCAAAGACACGCTGGGCCGCTATATCCTG 5330
|| | |||||||| | |||||||| ||||| ||| || |||| ||| | |
Sbjct 71985 AACCCAACTGACTGGGCCAGCATTGAACTGACCAAGGACGGTGTGAGCCGGTATGTGTTC 72044
Query 5331 GCGAACCCAGCGGCCCTGACTGGCCCTACCCTTTGGGGCCTGCCGGTGGTAGCAACCGAA 5390
|| || || || | || ||||||| || ||||||||||| || | | | |
Sbjct 72045 GCCAATCCTATGGGCATGGCTGGCCCGGTTCTGTGGGGCCTGCCTGTAGCTGAATCTCTG 72104
Query 5391 GCCGCAGCATTCCAGGGCAAGTTCCTGACCGGTGCATTCAACGCTGCGGCACAGCTGTTT 5450
||| || |||||||||||| ||||||| || |||| | |||||| |||||||||
Sbjct 72105 GCCATGGCG---CAGGGCAAGTTCATGACCGGGGCCTTCAGCCTTGCGGCGCAGCTGTTT 72161
Query 5451 GACCGTGAAGACGC 5464
|||||||| |||||
Sbjct 72162 GACCGTGAGGACGC 72175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120175062939594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |