Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq4198 100 4e-16
seq4761 86.0 1e-11
>seq4198
Length=487851
Score = 100 bits (110), Expect = 4e-16
Identities = 69/77 (90%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791
||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||
Sbjct 394273 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCC 394215
Query 169792 GTCAGTCCTGCCATTTT 169808
|||| || |||| |||
Sbjct 394214 GTCACTCGCGCCACTTT 394198
>seq4761
Length=1439414
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 123071 TTGTCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATT 123130
||||||||||||||||| ||| | || ||||||||| || ||||| || || |||||
Sbjct 1350399 TTGTCCTGTCAGCTGTACCAGAGGAGCGCTGACATGGGTCTGGGCGTGCCATTCAACATC 1350340
Query 123131 GCCTCTTACGCGCTCCTGATACACATGTTTGCCCA 123165
||||||||||| || || | |||||| | |||||
Sbjct 1350339 GCCTCTTACGCCCTGCTTACCCACATGATAGCCCA 1350305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 777582027423600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |