Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_020197.1 Length=45606 Score E Sequences producing significant alignments: (Bits) Value seq4953 96.9 1e-15 >seq4953 Length=802672 Score = 96.9 bits (106), Expect = 1e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 8357 GTTAACCGTCATTTCAAAAATGATAACGGAGAGCGTGAAACTGACTTTATCAATTGCGTT 8416 ||| |||||| ||||| ||| || || || || ||| ||||||| |||| || ||| Sbjct 673220 GTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTT 673161 Query 8417 ATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGC 8476 || ||| || | |||||||||||| || |||| | | || ||| || | |||| Sbjct 673160 ATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGA 673101 Query 8477 ATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAGCAAGGTCAACGTGTTTACGTG 8536 || || || |||||||| || | || || || |||| || ||||| ||||| || Sbjct 673100 ATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTT 673041 Query 8537 ACTGAAGTTGTCGCTGAAAACTT 8559 || ||||| || | ||| ||||| Sbjct 673040 ACCGAAGTAGTTGTTGAGAACTT 673018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145808697926656