Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_020489.1 Length=40489 Score E Sequences producing significant alignments: (Bits) Value seq4198 114 3e-21 >seq4198 Length=487851 Score = 114 bits (126), Expect = 3e-21 Identities = 126/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 4452 CAGTTCCTGGAAACGCGGCAGTTTC-AGGTGGTGGATCTGGCGCGGATCTGGGGCGTGCC 4510 ||||| |||||||||| || | | ||||| ||||| | ||||| |||||||| || Sbjct 141451 CAGTTGGTGGAAACGCG-CACTGCCCAGGTGCTGGATATTGCGCGTGCATGGGGCGTTCC 141509 Query 4511 GCCGCACTTGATCTTCGAGCTGTCGAAAGCGACGTTTTCCAACATCGAGCAGCAAAGCCT 4570 |||||| |||| ||||| ||||| || || || || || ||||||||||| || Sbjct 141510 GCCGCATCTGATTTTCGAACTGTCCAAGGCCACATTCGGGAATATCGAGCAGCAGTCTCT 141569 Query 4571 TGAATTTGTGACCTATCACCTGGGCCCGCATTTCGCCCGGGTGGC 4615 ||||| |||| ||||||||| ||||||||||| || || ||||| Sbjct 141570 GGAATTCGTGATCTATCACCTTGGCCCGCATTTTGCACGCGTGGC 141614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129435297573542