Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq1269 100 7e-17 >seq1269 Length=15413 Score = 100 bits (110), Expect = 7e-17 Identities = 175/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 23160 CGCCCGGCGAGGATGTCCTGGATCGCCTGGTTGAACGGGTTTTCGGTGCCGTTATGCGTC 23219 || |||| ||||||||||| | | | ||||||||||| | ||| ||||| || Sbjct 10148 CGTCCGGACAGGATGTCCTGCACCAGGAGATTGAACGGGTTCGTGTCGCCATTATGGGTG 10207 Query 23220 GAGCATACGACCACCTGCCCGCCCCACATCAGGAAGGCGAGCGCGGCCTTGAGCAGCTCG 23279 | || | ||||| |||||||||||||| || || || || || || || || || Sbjct 10208 CTGATAACAAGCACCTTGCCGCCCCACATCAGCAACGCCAGAGCAGCTTTCAGAAGTTCT 10267 Query 23280 TCGAGGCTATCGACGAAGGCAGCCTCATCGATGATGACCATACCCTGCTTGCCGCGCAGC 23339 || || ||| |||||| || ||||| || || |||| |||||| | ||||||| | Sbjct 10268 TCCAGATCATCATGGAAGGCGGCTTCATCAATAATCACCAATCCCTGCATACCGCGCAAC 10327 Query 23340 CCGCGCGGCGCAGAGCTGAGGGCGAGGATCTCGAAGCCAGATGCGAAGCGGATCCGGAAT 23399 | |||||| ||||| || || || | || | |||||||| || || || || Sbjct 10328 GCACGCGGCACAGAGGGAAGAGCCAGAACCTTGTTCCCAGATGCAAAATCCATACGAAAG 10387 Query 23400 GCTTGGATATGTTTC 23414 ||| || || |||| Sbjct 10388 ACTTTGACATCTTTC 10402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126504276521470