Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq2670 141 1e-28
>seq2670
Length=149592
Score = 141 bits (156), Expect = 1e-28
Identities = 342/518 (66%), Gaps = 0/518 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| || || | || || || || || ||||||||||| ||||| || |||||
Sbjct 142537 ACACCAATTGGCCCCATACCCGGGCCACCGCCACCATGTGGAATGCAGAAAGTTTTATGC 142478
Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302
| || | |||| ||||| |||| ||||| || ||| || || ||||| |||
Sbjct 142477 AGGTTAAAGTGACTAACATCCCCACCGTAGTCTGCCGGGCGTGCAAGCCCAACCTGAGCA 142418
Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362
|| | || || ||||| | ||||||||| ||||| || || | | ||| ||
Sbjct 142417 TTCATGTTGGCGCCATCCACATATACCTGCCCACCGGCTGAGTGCACCAGATCACAGATT 142358
Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422
| | |||||| |||||| || |||||||| || ||||| |||||||| | |
Sbjct 142357 TCACGCATGTTTTCTTCAAACACGCCATGAGTGGAAGGATAAGTAATCATCACTGCGGCC 142298
Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATCA 138482
|| ||| | || | || ||||| | |||| | || |||||||| |
Sbjct 142297 AGATCATTCGCATGCGCCTTTATTTTCTCACGCATGTCTTCCAGATCAATGTTGCCGCCT 142238
Query 138483 TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTT 138542
|||||||||| || | ||||| ||||| || ||||| ||| ||| || || ||
Sbjct 142237 GCATCACACTTTACCACCACAACCTTCATGCCCGCCATTTGGGCAGAAGCTGGGTTGGTA 142178
Query 138543 CCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGA 138602
||||| || || | || || | ||| || | | | | || || || ||||||
Sbjct 142177 CCATGCGCAGAAGCCGGAATTAAACAAACTGTCCGATGCCCTTCCCCACGCCCCTGATGA 142118
Query 138603 TATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAAT 138662
|| || | || | | || |||||||| || ||||| | || | |||||||| ||
Sbjct 142117 TACGCACGAATAACAAGCAAACCTGCATATTCCCCCTGCGCGCCAGAATTAGGTTGGAAG 142058
Query 138663 GATATAGAATCAAAACCTGTGATATCACATAACCATTT 138700
|| | || |||| |||| | ||| |||| | ||| ||
Sbjct 142057 GAAACAGCATCATAACCGCTAATAGCACACAGCCACTT 142020
Score = 100 bits (110), Expect = 3e-16
Identities = 162/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 139851 GCTAACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATT 139910
|| ||| ||| || ||||| ||||| ||||||||||||| ||||| | ||| || ||
Sbjct 140848 GCCAACGCCATGGCTTCTGCCGCTGCTGTTGCTTCATCTAGCAGAGAAGAGTTGGCGATA 140789
Query 139911 GGTAATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCC 139970
|| ||||| || ||||| || | |||||| | || || | ||||||| | ||
Sbjct 140788 TCCAACCCTGTCAGCTCTGTAATCATGGTTTGGAAGTTCAACAGGGCTTCCAGACGCCCT 140729
Query 139971 TGAGATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACG 140030
|| || || | ||||| || ||||||| |||||||||| ||||| || ||||
Sbjct 140728 TGGCTGATTTCTGGCTGATACGGCGTGTAAGCTGTGTACCAAGCCGGATTTTCCAGAATA 140669
Query 140031 TTTCGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAAG 140083
|| ||||| || || | ||| | || || || || ||||| || || ||
Sbjct 140668 TTCCGCTGGATAACAGCGGGCAGCACCGTACCGTAATACCCTTGCCCGATCAG 140616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578961192115320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |