Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_021861.1
Length=30910
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 89.7 1e-13
>seq4953
Length=802672
Score = 89.7 bits (98), Expect = 1e-13
Identities = 131/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 5079 TTTCAAAAATGCCAATGGAGAACGTGAAACAGATTTTATTAACTGTGTTATCTGGCGACA 5138
||||| ||| | ||||| || || ||| | || || | ||||||||||| |||||| |
Sbjct 673209 TTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAA 673150
Query 5139 ACAAGCTGAAAATATGGCAAATTTCACACATAAAGG-AAGCTTGATTGGTATCACTGGTA 5197
| ||||||||| | || || ||| ||||| || |||| |||| ||| |||
Sbjct 673149 ATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGTTCACTTG-TTGGAATCGAAGGTC 673091
Query 5198 GAATCCAAACTCGAAACTATGAAAATCAACAAGGACAACGTGTTTACGTTACTGAAGTTG 5257
| || || || ||||| || || || | || || ||||| ||||| ||||| ||||| |
Sbjct 673090 GGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAG 673031
Query 5258 TTG 5260
|||
Sbjct 673030 TTG 673028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 98784368907824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |