Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq4523 150 1e-31
seq4863 86.0 5e-12
>seq4523
Length=700759
Score = 150 bits (166), Expect = 1e-31
Identities = 154/199 (77%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 34447 GTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGC 34506
||||| ||||||| |||||| || || ||||| || || || ||||||| ||||| |
Sbjct 14567 GTTTGGGCGCCCAACTCGCATCCAAAATACTTGGTTGGATACGTGGCCGGTCGTCCGATG 14626
Query 34507 GCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCG 34566
||| || | |||| ||||||||| | || ||||| ||||| || ||||| || |||
Sbjct 14627 GCCCGTGCCACCTCGGCCATGTTGACCAGAACGGTCTTAATGCCATTTCCCTTGCCCTCG 14686
Query 34567 ACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGT 34624
||||| || |||| ||| ||||| |||||||||||||| ||||| ||| ||||||
Sbjct 14687 ACCTTTGCCTGCAG--GCGTGGCATCTTGTAGCGGTAGAAGATGTCCGTCACGCTGCGGT 14744
Query 34625 TAACGTTCACAGTCCCCAT 34643
|||||||||| ||| ||||
Sbjct 14745 TAACGTTCACGGTCGCCAT 14763
>seq4863
Length=1240122
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || || ||||| | |||||||| ||||| ||| | || |||||||
Sbjct 1063879 ATGCAGATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCTTCG 1063938
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | || || ||||| ||||| || ||| | ||| |||||
Sbjct 1063939 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 1063998
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | ||| || || ||||||||||||| | | || || | || ||||||
Sbjct 1063999 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTACAAC 1064058
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || || || || ||||| ||||| | | ||||| || ||
Sbjct 1064059 ATCCAGAAGGAGTCGACCCTGCACTTGGTGCTCCGCCTGCGTGGTGG 1064105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412815733022513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |