Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq4198 141 5e-29 >seq4198 Length=487851 Score = 141 bits (156), Expect = 5e-29 Identities = 434/663 (65%), Gaps = 11/663 (2%) Strand=Plus/Plus Query 67598 GCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCT 67657 || || || || || |||| || | ||||| || ||||| || ||||| || || Sbjct 210612 GCGCTGGGTATTGGTGGGTTGCCCCGTGGCCGTGTGGTGGAAATTTACGGGCCAGAAAGC 210671 Query 67658 TCAGGGAAGTCAACGTTGTGC-CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAA 67716 || || || | ||| | ||| || || || | || | || || ||| ||||||| Sbjct 210672 TCTGGTAAAACCACGCT-TGCGCTGCATGCTATTGCAGAAGCACAAAAGCGTGGTGGCAC 210730 Query 67717 CGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGT 67776 || | || || ||||| ||| | | ||||| | || ||| ||| || || Sbjct 210731 TTGTGCTTTTATTGATGCCGAGCATGCGTTGGACCCCGGTTATGCCAAAAAGCTGGGCGT 210790 Query 67777 GGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGT 67836 |||||| || || || || | |||||||| | || || ||||| |||| || | Sbjct 210791 GGATGTAGATAACCTGCTGATCAGCCAGCCAGATGCGGGTGAACAGGCGTTGGAAATTGC 210850 Query 67837 TGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCT 67896 || ||||| || |||| || | | | || || || ||| || || || Sbjct 210851 AGATACACTCGTGCGATCCGGCGCTATTGACGTTTTGGTGGTAGATAGTGTTGCAGCACT 210910 Query 67897 GGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCG 67956 ||||||||| || || || ||||| ||||| || || || || ||||| ||||| || Sbjct 210911 GGTGCCGCGCGCAGAACTGGAAGGAGACATGGGCGATAGCCATGTTGGCCTTCATGCGCG 210970 Query 67957 CCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCAC 68016 ||||| ||||| |||| ||||| || || ||| | || || |||| || || | Sbjct 210971 TTTGATGAGCCAGGCTTTGCGTAAGCTTACGGGTACGGTGGCACGCTCCAATACTCTGAT 211030 Query 68017 CCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAG 68074 | | |||| ||| | ||| ||| || || | || | || ||| || Sbjct 211031 GATTTTCCTGAACCAGATCCGCCTGAAAATTGGTGTGATGTTTGGTAAT--CCG---GAA 211085 Query 68075 ACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGG 68134 || ||||| |||||||| || ||| ||||| | || |||||||||||| | ||| | Sbjct 211086 ACAACCACGGGTGGTAATGCCCTGAAGTTCTATTCTTCCGTGCGTATGGATATTCGCCGC 211145 Query 68135 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC-GGCAACCGCACGCGCGTGAAGGTTGT 68193 |||| | ||||| ||||||| || | || || | |||||||| |||||||| Sbjct 211146 ATCGGGTCTATCAAGGACAAGGATGAGG-TGACAGGTAATCAGACGCGCGTAAAGGTTGT 211204 Query 68194 CAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGG 68253 || |||||| ||||||| || ||| |||| || ||| ||| | |||||||| || Sbjct 211205 TAAAAACAAGATGGCGCCACCTTTCCGTCAGGTAGAATTTGATATCATGTACGGCGAAGG 211264 Query 68254 CAT 68256 ||| Sbjct 211265 CAT 211267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247434095813328