Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_022757.1
Length=38880
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 152 1e-32
>seq4953
Length=802672
Score = 152 bits (168), Expect = 1e-32
Identities = 224/317 (71%), Gaps = 0/317 (0%)
Strand=Plus/Minus
Query 27422 ATGCTTAATTCAGTTGCTTTAACAGGCAGATTAACTAAACCGGTTGATCTTCGCTATACG 27481
||| ||||| |||| | | | || || | ||||| | |||||| | || || ||
Sbjct 673316 ATGATTAATACAGTAGTTCTTACTGGACGCTTAACACGAGACGTTGATTTGCGATACACC 673257
Query 27482 CAAAGCGGAACAGCGGTTGGTTCATTTACGATTGCTGTTGATCGCCAATTTCGTAGCGCA 27541
|||| || | || |||||| | ||||| | |||||||| || | || | |
Sbjct 673256 CAAAATGGCGCGGCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCG 673197
Query 27542 AATGGGGAACGAGAAACTGACTTCATCAATTGTGCCATCTGGCGTAAGTCTGCCGAGAAT 27601
||||| || || ||| |||||||| |||| |||| || ||||| || || || || ||
Sbjct 673196 AATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAAC 673137
Query 27602 TTTGCCAACTTCACGCACAAGGGTTCACTTGTTGGCATCGAAGGTCATATCCAAACACGT 27661
|||||||||||| ||| ||||||||||||||||| |||||||||| || || || ||
Sbjct 673136 TTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGA 673077
Query 27662 ACGTATGATAACGCGCAAGGCCAGAAAGTATTCGTGACTGAGGTCATTGTTGAGAATTTT 27721
| || || ||| ||| ||||| ||| | || || || || |||||||||| |||
Sbjct 673076 AATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTGTTGAGAACTTT 673017
Query 27722 GCTTTGCTTGAATCACG 27738
| | |||||| ||||
Sbjct 673016 ACCCTCCTTGAACCACG 673000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124286811904564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |