Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_022920.1 Length=139738 Score E Sequences producing significant alignments: (Bits) Value seq5094 84.2 2e-11 >seq5094 Length=366253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 35767 GACACCTAGAGCTTCAATCTAGTGCTCTACCATCTGAGCTAAGAAACCTTGTAA-CGACT 35825 ||||| ||||||||||| |||||||||| |||||||| | || | ||| || | Sbjct 1484 GACACACGGAGCTTCAATCCGTTGCTCTACCAACTGAGCTACCGAGCCGTTTAAGCGGTT 1425 Query 35826 CATACGAGACTCGAACTCGTACTCTCTGCCGTGACAGGGCAGTGT-GTTAACCAGTTACA 35884 | |||||||||||||||||| |||| ||||||||| | || | ||||| || | Sbjct 1424 CGTACGAGACTCGAACTCGTGATCTCCTGCGTGACAGGCAGGCGTCCTGAACCAACTAGA 1365 Query 35885 CCAATGAGCCAAAAT 35899 |||| || ||||||| Sbjct 1364 CCAACGAACCAAAAT 1350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447004872503280