Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_023574.1
Length=128546
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 260 1e-64
>seq4953
Length=802672
Score = 260 bits (288), Expect = 1e-64
Identities = 1206/1881 (64%), Gaps = 71/1881 (4%)
Strand=Plus/Plus
Query 67982 AAATTTCGATTTACAACTTTCATGGGTGCTTATAAATTTTACACACAGTATGCTATGCGC 68041
|| |||| || | | | ||||||| |||||| || || || | || || || |||
Sbjct 185090 AATTTTCACTTCAAATCATTCATGGCTGCTTACAAGTTCTATGCTCAATACGCAATG--- 185146
Query 68042 ACCACAGATAACAAGTCAATT--CTT-GAACGATATGAAGACCGCATTGCTTTTAATGCC 68098
| || || |||| || || ||| ||| | || ||| || | || | || ||
Sbjct 185147 AAAACTGACGACAACTCCATGTACTTAGAAGGCTACATAGATCGGACAGCAATGAACGCA 185206
Query 68099 TTAGTTATGGCTGATGGTGACGAACAATTGGCTCTTAACATTGCGCATGAAATGATTTCA 68158
|| || | ||| |||||||| || |||| ||| | || | || ||||| | |||
Sbjct 185207 TTGTTTCTAGCTAATGGTGACCAAAAATTAGCTATGAATCTAGCTGATGAATTAATTCAT 185266
Query 68159 CAAACCTATCAACCTGCAACACCAACATTCTCTAATGCTGGTAAGTTGCGTGGTGGTAAT 68218
|| | ||||||||| || || || || | || ||||| ||| ||| | ||| |
Sbjct 185267 CAGCGTTTTCAACCTGCCACCCCTACTTTTTTGAACGCTGGAAAGAAACGTCGGGGTGA- 185325
Query 68219 GCTG-TATCATGTTTCCTTTTGAATATTGAAGATAATATGACGTCTATTGGGCGCTCAGT 68277
| || | ||||||||| | | | | ||||| |||| | || || | | |
Sbjct 185326 GTTGATTTCATGTTTCTTACTTCAGACCACCGATAACATGAATACGATCGGTAGAACCAT 185385
Query 68278 AAATTCAGTTCTTCAATTGTCTAAAATGGGTGGTGGAGTTGGAATCAACTTAACTGATAT 68337
||||||| ||||||||| || ||||| ||||| ||||||||||| || | || | |
Sbjct 185386 TAATTCAGCTCTTCAATTATCCAAAATTGGTGGAGGAGTTGGAATTAATCTTTCTAACCT 185445
Query 68338 CCGTCCGTCAGGAGACCCTATCAAGGGTATTGA-GAATATGGCTGATGGAGTTGTTCCAA 68396
| | | || || || || || ||| | | | | | | ||| ||| |||||
Sbjct 185446 AAGAGCTGCTGGTGATCCCATTAAACACATTCAAGGAGCAGCCAG-TGGTGTTCTTCCAG 185504
Query 68397 TCATGAAACT-CTATGAAGATTCATTTTCA--TATGCCAATCAGTTGGGGACAAGAAATG 68453
| ||||| | ||| |||||| | ||||| ||| |||| || | || |||||| |
Sbjct 185505 TAATGAAGTTACTA-GAAGAT--AGTTTCACCTATTCCAACCAACTAGGCCAAAGAAACG 185561
Query 68454 GGGCAGGAGTAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTCCTCTCTACaa 68513
| || || || |||||| | ||| |||||| || || || ||||| | |
Sbjct 185562 GTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTCTTGGGAGTTA 185621
Query 68514 aaaaaGAAAATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGTGTTGTAGTTC 68573
|||| ||||| || ||||||||| | || || || || ||||| || ||||| || || |
Sbjct 185622 AAAAGGAAAACGCCGACGAAAAAATCCGAGTAAACACCCTTTCACTTGGTGTGGTTGTGC 185681
Query 68574 CTGATAAATTCTATGAACTCATTGCTAAAGGTGA--ATCA-ATGTATTTGTTTAGCCCTT 68630
| |||||||| ||||| ||| |||||| ||| || | ||||| | || || || |
Sbjct 185682 CAGATAAATTTTATGAGCTC---GCTAAAAATGATGATGATATGTACCTATTCAGTCCAT 185738
Query 68631 ATGATATCTACAATGAGTATGGAAAACTAATGTCTGAAATCAACATCACAGAAATGTATG 68690
||||| | | |||||||||| | | || | | | || | || || |
Sbjct 185739 ATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCTAAAGAATACG 185798
Query 68691 ATGAATTAGTTGAAAACAAAAATATC---AAGAAAGATAAAATCTTTGCTCGTGACCTTG 68747
| | | || | ||||| || || |||||| || || |||||||| ||||
Sbjct 185799 ACAATATGGTCAAGAACAAGAACATTTCTAAGAAA---AAGATTCGAGCTCGTGAACTTG 185855
Query 68748 AAGAAGAAATGTCTAAACTTATTCAAGAATCAGGATATCCATACATCATCAACATTGATA 68807
|| ||||| ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct 185856 AAACCGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATCAACATTGACA 185915
Query 68808 CAGCAAACCAAGAAAATGCTGTTGACGGTGTAATTAAAATGTCTAACCTTTGCTCTGAAA 68867
| | |||| || ||| | |||||||| ||| ||| ||| || || | ||||
Sbjct 185916 CCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTGTGTACCGAAA 185975
Query 68868 TCCTTCAAGTACAATCTCCAT-CAGAATTGAACTCAGACCAAACTTATAAGACTATTGGA 68926
| || || || || | || | || |||| || ||||| || | | | |||
Sbjct 185976 TTCTCCAGGTTCAGACACCTTCCATCGTTGACGATGAACAAAACTACGAACAGT-TAGGA 186034
Query 68927 ACTGACGTATCATGTAACCTTGGTTCAACTAA--TATTACACATCTTATGGAGTCATCTG 68984
|| || || |||||||| || || || ||||| || | || || |||| ||| | |
Sbjct 186035 ACCGATGTCTCATGTAATCTGGGCTCTACTAACGTAGTGAAC--CTCATGGCATCACCAG 186092
Query 68985 ACTTCGGAAGCTCTGTTAGAACAGCAT--TTCGTGCATTAACCTATGTTGCAGATAGCTC 69042
||||||| | || ||| ||| ||| | || |||||| ||| | ||| |||
Sbjct 186093 ACTTCGGTAAATCAGTT-GAA-GCCATGGTGAAAGCTCTAACCTTCGTTACCGATCACTC 186150
Query 69043 TAACATTGAAGAAGTTCCTACTGTTAAGAACGCCAACGA--TAAGTATCACTCAGTAGGG 69100
||| | | ||||| | ||||| ||| || || |||| ||||||| | ||
Sbjct 186151 ATCAATTAACGTGGTTCCATCAGTTAAACACGGAAATGAACTAAG--TCACTCAATTGGT 186208
Query 69101 CTAGGGGCAATGGGACTACATGGATTCCTTGCTAAAAATGGTATTCTCTATGGTTCTCCT 69160
| || || ||||| || ||| || ||||||||||| ||| |||||| || |||
Sbjct 186209 TTGGGAGCCATGGGTCTTCATTCATATTTTGCTAAAAATCATATGTACTATGGCTCACCT 186268
Query 69161 GAATCAATTGAGTTCACAGGTATGTACTTCCAACTCCTAAACTACTGGACTCTATTTGAA 69220
|| || ||||| || || ||| ||||| || ||||||||||||| | ||||
Sbjct 186269 GAGTCCATTGAATTTACCAGTACCTACTTTATGCTTTTAAACTACTGGACCC----TGAA 186324
Query 69221 AG----TAATCGAATTGCTATTGAGCGCAATCAAGCTTTCTATAACTTTGATAAATCAGA 69276
| ||||| ||| |||| || ||| ||| |||| |||| || || ||| |
Sbjct 186325 GGCTTCTAATCAAATGGCTAAGGATCGCGGAAAAGTTTTCCATAATTTCGAAAAAAGTAA 186384
Query 69277 ATATGCCAATGGTAAATACTTCAAACGCTA-TCTACCACGTGTTAAATTTAAAAATAACC 69335
|||||| |||| || ||| | | || |||||| | ||| | |||
Sbjct 186385 ATATGCTGATGGATCTTATTTCGATCAGTACACTACCAAGAGTTGGGCTCCAAA------ 186438
Query 69336 TTTCTGATACAGTCAAAGAATTGTTTAAAGATGTTGATATTCCAACTGCACAAGACTGGG 69395
|| |||| ||| ||| | ||||| | | || ||||||||| | | ||||||||
Sbjct 186439 -GTCAGATAAAGTAAAATCACTGTTTGATGGCGTCTTTATTCCAACCGAAAAAGACTGGA 186497
Query 69396 TTGACCTACAGGCTTCAATTGAAGAACATGGTCTATATAATTCTTACCGTTTAGCTGTTG 69455
| || | ||| | || ||||||| || || | || | || || |
Sbjct 186498 ACGCTTTAAAACAATCAGTCATGGAGTATGGTCTCTACCATCAGAATCGCATGGCCGTAG 186557
Query 69456 CGCCTACAGGTTCAATTTCTTATATCAACGAAGCTACAGCATCTATTCACCCAATTGTAC 69515
| |||| ||||||| | |||| || || || |||||| | | || || ||||| |
Sbjct 186558 CTCCTAATGGTTCAACTGCTTACATTGGGGATGCAACAGCAAGTTTGCATCCGATTGTTC 186617
Query 69516 AAAAGATTGAGAAACGCTCAGAGGGTAAACGTGGTGATGTATTCTATCCAGCACCTTATC 69575
|||| ||||| |||| ||| || ||| | | ||| || || || || |
Sbjct 186618 AAAAAATTGAAGCACGCCAAGAATCAAAGATTGGAACCATTTACTACCCGGCTCCATACC 186677
Query 69576 TTGCAGAAGGTC----TTCCCTTCTATGAATCAGCCTACAATATTGACCAGCGCCAAATC 69631
|| || || | | |||| | ||||||||||||||| | | |||| ||| || |
Sbjct 186678 TTTCA-AATGACACCATTCCTTACTATGAATCAGCCTATGACACTGACATGCGTAAAGTA 186736
Query 69632 ATTGACGTCTACGCAGAAGCGCAAAAACATGTTGACCAAGCTCTTTCTATGACACTCTTC 69691
||||| || ||||| | || ||||| || ||||| |||| | | | || |||||
Sbjct 186737 ATTGATGTTTACGCTGCCGCTCAAAAGCACGTTGATCAAGGAATGAGTTTAACCCTCTTT 186796
Query 69692 ATGAATGCAGACCA-CGGAAAAGATTTGTATGAGTGGAAAATTGGAACAAGTGGTGAAGA 69750
||| | || |||| ||| | | | ||||| |||||| ||| | |||| ||
Sbjct 186797 ATGCGTTCA-ACCATTCCAAAGGGTCTTTATGAATGGAAAGATGGTAGAAGT------GA 186849
Query 69751 CTCATTCACTACACGTGATATCAATATCTTGCGTAACTATGCATGGTCTAAAGGTATTAA 69810
| | | | || | ||| | | ||| | || || ||||| | ||||| |||||
Sbjct 186850 CAAAATGTCAACCAGAGATTTAACGATCCTTCGAAATTATGCTTACAAAAAAGGCATTAA 186909
Query 69811 ATCAATCTATTACGTTCGCAC 69831
|||| |||||||||| || ||
Sbjct 186910 ATCACTCTATTACGTGCGAAC 186930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 411196634475007
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |