Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq4764 95.1 2e-14
>seq4764
Length=1750656
Score = 95.1 bits (104), Expect = 2e-14
Identities = 179/261 (69%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 183022 CTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGA 183081
|| ||||| || | ||| | ||| || | | || || ||||||||| |||| || ||
Sbjct 341581 CTGTGGAACGCGGCGCAACTGCAGCTGGTTCGCGAGGGCAAAATGCATGGTTTCTTGCGC 341640
Query 183082 ATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGC-TTTGAGTTA 183140
||||||||||| || ||||| || || |||| || ||||| | || | ||| ||
Sbjct 341641 ATGTACTGGGCCAAGAAGATCCTCGAGTGGAGCCCCACGCCGGAGCAGGCGCTCGAG-TA 341699
Query 183141 TAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGG 183200
||| ||||| | |||||| || ||||| ||||| ||||| || || ||
Sbjct 341700 CGCCATCCTGCTGAACGACAAGTACAGCCTGGACGGGCGCGATCCCAACGGCTATGTGGG 341759
Query 183201 TTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGG 183260
||| |||||||| || |||| | ||||||| | ||||| || | | || || ||
Sbjct 341760 TTGCATGTGGTCCATCGGCGGCGTCCACGATATGGGCTGGAAGGAGCGGGCCATCTTCGG 341819
Query 183261 AAAGATAAGATATATGAATTA 183281
||||| | || ||||||||
Sbjct 341820 TAAGATTCGGTACATGAATTA 341840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903353144537760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |