Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_025963.1
Length=139981
Score E
Sequences producing significant alignments: (Bits) Value
seq4969 159 3e-34
>seq4969
Length=1161901
Score = 159 bits (176), Expect = 3e-34
Identities = 210/285 (74%), Gaps = 6/285 (2%)
Strand=Plus/Minus
Query 5333 AGAAGCACTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTT 5392
||| || ||||||||||| ||| || | ||||||||| ||| |||| |||| || |
Sbjct 226130 AGATGCGCTCGCAGATGAACTGGGCGATGCGGTCGCCGCGCTTCACCTCGAA-CTC-CAC 226073
Query 5393 GGCCGA--AGTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCC 5450
| |||| |||||| ||||| || |||||||| || ||| ||||| |||||| |||||
Sbjct 226072 GTCCGAGTGGTTGAACAGCACGACGCCCAGGTTGCCACGGTAGTCCTCGTCCACCACGCC 226013
Query 5451 CGCTCCCACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTA 5510
|||||||| || | |||||| || || || |||||||| | || |||||||| |||||
Sbjct 226012 GGCTCCCACGTCGATGAAGTTCTTCACGGCCAGACCGGAGCGTGGGGCCACGCGTCCGTA 225953
Query 5511 GCAGCCGTATGGCGGGTGGATCTGCAGATCGGTCAGCACTACCG-CGCGCCCCATCGGCG 5569
| |||| | ||| |||| |||||| |||||| ||| || | | ||| | | | ||
Sbjct 225952 GGAGCCCTCGGGCACCTGGACCTGCAGGTCGGTCTTCACAACGGCCTTGCCTCGT-GCCG 225894
Query 5570 GCAAGGTGTAGTCGTAAGCGCTGTACAGGTCGTAGCCGGCCGCCT 5614
||| |||||| |||||| |||||| |||||| ||||
Sbjct 225893 GCACCACAATGTCGTAGGCGCTGCGCAGGTCCACGCCGGCAGCCT 225849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447782422532760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |