Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq4765 105 6e-18
>seq4765
Length=3541379
Score = 105 bits (116), Expect = 6e-18
Identities = 301/457 (66%), Gaps = 8/457 (2%)
Strand=Plus/Minus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|||||||| || || | ||| || || || || || | || || ||||| || || ||
Sbjct 3010794 ACGGTGAACTGTATGGCATTGGCAGCCGGCTTCGTGCGGAGGTAATACATCCCGGTTTTA 3010735
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
| || || ||| || ||| ||||| |||| || | |||| | || || |||
Sbjct 3010734 AGGCCAGCCTTCCACGAGTAAAAGTGTATGGATGTCAGCTTGCCATAGTTGGGCTCAGCC 3010675
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
|| || || | |||||| ||||||||||| | | ||||| ||||||||||| ||
Sbjct 3010674 ACATGAATGTTGAACGATTGACTCTGATCGATAAACGCACCGCGATCTGCGGCCAT-TTT 3010616
Query 136819 AATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCGG 136877
||| || ||| | | || |||||| | || || | || || ||||| | ||
Sbjct 3010615 AATGGTGGATTTCACAGAGATCTCCCAAACCGTCTTGTACAGATCGCGAACATTCTGGGG 3010556
Query 136878 AATTTCATCGATATTCTGTACAGATCC---GTTGTTTTTGATGATTTTCATCATGAGATC 136934
||| | ||||||||||| | ||| || | || |||| ||| ||||| |||
Sbjct 3010555 AATGGCCTCGATATTCTGGATAGAGCCACGGCTGGAAATGATCTGGTTCTTCATGTCATC 3010496
Query 136935 AGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994
| || | | || ||| | || | | || || || || || || || |
Sbjct 3010495 A-TC--CCACAAGTCCAGCTCAGTTAGATCCCGCAATAGGTGATGGTTGACCACCTGGAA 3010439
Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054
|||||| || || || | |||| || | ||| | ||| |||||||||| ||||||||
Sbjct 3010438 TTCGCCGGAGAGAACGCGGCGTGTATAGATATTCGTGGTGTACGGCTCGAAGGATTCGTT 3010379
Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATG 137091
||| |||| ||||| ||||| | || || ||||||
Sbjct 3010378 GTTGCCCATTATCTGGGCAGTGGATGCCGTGGGCATG 3010342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445065797121120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |