Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq4761 224 1e-53
>seq4761
Length=1439414
Score = 224 bits (248), Expect = 1e-53
Identities = 353/498 (71%), Gaps = 12/498 (2%)
Strand=Plus/Plus
Query 146842 AAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGG-GTT 146900
|| || || ||||||| |||| | | ||| |||||||| || || || || ||
Sbjct 1350149 AAGTCCTCAATGTCCTGCACCTTGCGCTTGATCACCAGCTTGGGAAACGGACGCGGAGTG 1350208
Query 146901 C-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959
| ||| |||||| ||||| || ||||| || || |||||||| || ||||| ||||
Sbjct 1350209 CGCTG--CAGCTGCTCCTTCAGCGGATCCACATGATTTAGGTAGACATGAGCGTCGCCCA 1350266
Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019
||| || |||||||| || ||||| || || ||||| ||||| | ||||| ||| ||||
Sbjct 1350267 TGGTATGAACAAAGTCACCAGGCTTCAGACCTGTCACATGGGCTATCATGTGGGTAAGCA 1350326
Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079
| | ||| ||| |||||||| || || ||||| |||||||| | |||||||||||
Sbjct 1350327 GGGCGTAAGAGGCGATGTTGAATGGCACGCCCAGACCCATGTCAGCGCTCCTCTGGTACA 1350386
Query 147080 GCTGGCACGAGAGCTCCCC---GTC---GGCCACGTAAAACTGGCACAGGATGTGGCACG 147133
|||| || || | ||| || ||| || ||| | ||||| |||| ||| || |
Sbjct 1350387 GCTGACAGGACAACTCGCCACGGTCCTGGGATACGAAGAACTGCGCCAGGCAGTGACATG 1350446
Query 147134 GCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGC 147193
||||||||||||| || | ||| ||| ||||| || || | | | ||||||
Sbjct 1350447 GCGGCAGCGCCATCTTTGGTATATCCAGGGGATTCCATGCGGACATGATGATGCGCCTGT 1350506
Query 147194 TCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCC 147253
| || || |||| ||| ||||| ||| | ||||||||| | ||||||||| |
Sbjct 1350507 CCGACGGATTGTTCTTTATCGTCTCGATCACCTGACGCAGCTGGTCGATGCCCTGGCCGC 1350566
Query 147254 CGTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTAC 147312
|||| | ||| ||||| ||| ||||||||||||| |||||||||||||||
Sbjct 1350567 TGTAG-TCGTCGTCGCAGGTGCGATACTCTGCCCCAAAGTGCCGCCACTGGAAGCCGTAT 1350625
Query 147313 ACTGGCCCCAGGTCGCCG 147330
|| || |||| || |||
Sbjct 1350626 ACCGGGCCCAAATCTCCG 1350643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583450503602400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |