Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq4764 141 8e-29
seq4810 140 3e-28
seq4644 134 1e-26
seq4863 116 3e-21
seq4765 109 5e-19
seq4969 84.2 2e-11
>seq4764
Length=1750656
Score = 141 bits (156), Expect = 8e-29
Identities = 209/291 (72%), Gaps = 4/291 (1%)
Strand=Plus/Plus
Query 44131 TGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCGTA 44190
|||||||||| || ||| || ||| | || || || |||||||| | | |||| |
Sbjct 341582 TGTGGAACGCGGCGCAACTGCAGCTGGTTCGCGAGGGCAAAATGCATGGTTTCTTGCGCA 341641
Query 44191 TGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCG-CGCTCGTTCAT 44249
|||| ||| ||||||||| | |||||| | | || | | | |||||| |
Sbjct 341642 TGTACTGGGCCAAGAAGATCCTCGAGTGGA-GCCCCACGCCGGAGCAGGCGCTCGAGTAC 341700
Query 44250 GCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGGA 44309
|||||| ||||||||||||||||| ||||||| ||||| |||||||| || || ||
Sbjct 341701 GCCATCCTGCTGAACGACAAGTACAGCCTGGACGGGCGCGATCCCAACGGCTATGTGGGT 341760
Query 44310 TGTATGTGGTCCATTTGCGGTGTCCACGACAGGGCGTGGCGAGAGCTACCCATCTACGGC 44369
|| ||||||||||| |||| |||||||| | || ||| |||| |||||| |||
Sbjct 341761 TGCATGTGGTCCATCGGCGGCGTCCACGATATGGGCTGGAAGGAGCGGGCCATCTTCGGT 341820
Query 44370 AAAGTGCGCTACATGAACTACAACGGTTG-CGTCAGAAAGTTTGATGTAAA 44419
|| | || |||||||| ||| | || || || | | |||||||| || ||
Sbjct 341821 AAGATTCGGTACATGAATTACCAAGGCTGTCGGC-GCAAGTTTGACGTGAA 341870
>seq4810
Length=1195048
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | | || |||||||| || || |||||| || ||||||||||||| |
Sbjct 316986 CCGCCACGCAGACGCAGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGAC 316927
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
||||| || |||| ||||||||||| || ||||| |||| ||||||||||| | |||
Sbjct 316926 AAGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 316867
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||| | | | | |||||| | || |||
Sbjct 316866 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGGCTCGACC 316807
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || || |||||||| || || || ||||||||
Sbjct 316806 TCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 316760
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||||| || ||| || |||| ||||||||||| || |||||
Sbjct 316495 CTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCCAGCTGCTTTCCGGCAAA 316436
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | |||| || |||||||||| |||||| ||| | |
Sbjct 316435 GATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 316376
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| | || ||||| | ||||| || || || |||||||| || ||
Sbjct 316375 CTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTGATAGTCTTGCCGGTCAAAGTCTTGAC 316316
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 316315 GAAGATTTGCAT 316304
Score = 98.7 bits (108), Expect = 9e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || | | || || | || ||||||||||| || |||||
Sbjct 316723 CTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCCTCCAGCTGCTTTCCGGCAAA 316664
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | |||| || |||||||||| |||||| ||| | |
Sbjct 316663 GATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 316604
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | || ||| | || ||||| | ||||| || || || |||||||| || ||
Sbjct 316603 CTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAAGTCTTGAC 316544
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 316543 GAAGATCTGCAT 316532
>seq4644
Length=1132839
Score = 134 bits (148), Expect = 1e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||||||| | || |||||| || |||||||| |||| | ||| || |||| ||
Sbjct 752517 CACCAAATGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTC 752458
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || ||||| |||||||| || | ||| | | ||||||||||
Sbjct 752457 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTG 752398
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | |||||| | |||||||||| ||||| || ||
Sbjct 752397 GATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTT 752338
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || |||||||| ||||||||||
Sbjct 752337 TCCGGTCAGGGTCTTCACAAAGATCTGCATTC 752306
Score = 132 bits (146), Expect = 4e-26
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || |||||||| |||| | ||| || |||| ||
Sbjct 751832 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTC 751773
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || ||||| |||||||| || | ||| | | ||||||||||
Sbjct 751772 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTG 751713
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | ||||| | ||| ||||||| ||||| || ||
Sbjct 751712 GATCTTGGCCTTCACATTCTCAATGGTGTCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 751653
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737
|| ||||| ||||||||||| |||||||||
Sbjct 751652 TCCAGTCAAGGTTTTCACAAAGATCTGCATT 751622
Score = 125 bits (138), Expect = 6e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || |||||||| |||| | ||| || |||| ||
Sbjct 752289 CACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTC 752230
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || ||||| |||||||| || | ||| | | ||||||||||
Sbjct 752229 CAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTG 752170
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | |||||| | |||||||||| ||||| || ||
Sbjct 752169 GATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTT 752110
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| || | ||| ||||| || ||||||||||
Sbjct 752109 TCCGGTAAGAGTCTTCACGAAGATCTGCATTC 752078
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || |||||||| |||| | ||| || |||| ||
Sbjct 752745 CACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCCTC 752686
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || ||||| |||||||| || | || | | |||||||||
Sbjct 752685 CAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGTATTCCCTCCTTGTCTTG 752626
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
||| || ||||| | | | | |||||| | ||||| |||| ||||| || ||
Sbjct 752625 GATTTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTT 752566
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| || |||||||| ||||||||||
Sbjct 752565 TCCAGTCAGGGTCTTCACAAAGATCTGCATTC 752534
Score = 102 bits (112), Expect = 7e-17
Identities = 151/213 (71%), Gaps = 1/213 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| || | || |||||| || |||||||| || | | ||| || | || ||
Sbjct 752061 CACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCCTC 752002
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || || | |||||||| || | ||| | | ||||||||||
Sbjct 752001 CAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTG 751942
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT-TT 35705
|||||| ||||| | | | | |||||| | ||||| |||| ||||| || ||
Sbjct 751941 GATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTT 751882
Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| | || | ||| |||||||| ||||||||||
Sbjct 751881 TCCGAGTAAGAGTCTTCACAAAGATCTGCATTC 751849
>seq4863
Length=1240122
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || | || |||||| || |||||||| |||| |
Sbjct 1064105 CCACCACGCAGGCGGAGCACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1064046
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||||||||| || ||||| |||| |||||||| || | |||
Sbjct 1064045 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGA 1063986
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||| | | | | | ||||| | ||||||
Sbjct 1063985 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCCGAAGGCTCCACC 1063926
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||||| || || || || | |||||||| || ||||||||
Sbjct 1063925 TCCAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 1063879
>seq4765
Length=3541379
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | |||||| || || ||| |||||| |||||||| || || |
Sbjct 2921400 CCACCACGAAGGCGGAGCACCAAGTGCAAGGTAGACTCCTTCTGAATGTTATAGTCAGAG 2921459
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || ||||||||||| || ||||| |||| |||||||| || | ||||
Sbjct 2921460 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGATCTGGAGGA 2921519
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | || |||||| ||||| || | | || | | ||||| || ||| |||
Sbjct 2921520 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTGTCCGACGGTTCGACC 2921579
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742
|| | ||||| || || ||||| | || ||||| || |||||||| ||||
Sbjct 2921580 TCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATCTTGTG 2921632
>seq4969
Length=1161901
Score = 84.2 bits (92), Expect = 2e-11
Identities = 235/357 (66%), Gaps = 8/357 (2%)
Strand=Plus/Minus
Query 41101 CCTGTAGACCCAAAACCACCACCTCCGCGTTCCGTCACGTCCAACGACTCGACCAGCTTT 41160
|| || || || || ||||| ||||||| || || | |||| | ||||||||||
Sbjct 226203 CCGGTGGAGCCGAATCCACCTTCTCCGCGCTCAGTGTCCTCCAGCTTGTCGACCAGCTCC 226144
Query 41161 GGCGTGGCAATGTGGATGCGCTCGAGGATCAGCTGCGCGACACGATCACCCTTCATCACC 41220
|| | | | |||||||||| ||| | ||| |||| || || || | |||||
Sbjct 226143 AGCTCCGGATAGAAGATGCGCTCGCAGATGAACTGGGCGATGCGGTCGCCGCGCTTCACC 226084
Query 41221 ACAAAGTCCACGTCGTTGTTGTTCACCATCACTATGCCCACGTTGCCCGTGTAGTCGGGA 41280
| || |||||||| || ||| | || ||| | ||||| |||||| ||||||
Sbjct 226083 TCGAACTCCACGTCCGAGTGGTTGAACAGCACGACGCCCAGGTTGCCACGGTAGTCCTCG 226024
Query 41281 TCGATGACGCCAGCAGCAATGTCGATCTTGTGCTTCAACGCCAGCCCCGATCGGGGCGCG 41340
|| | ||||| || | | |||||| || ||||| ||||| || || || || ||
Sbjct 226023 TCCACCACGCCGGCTCCCACGTCGATGAAGTTCTTCACGGCCAGACCGGAGCGTGGGGCC 225964
Query 41341 ATCCTACCGTAACAATCTTTGGGCAGCTGCAGAGCAATGTCCGTCTTGATCAGCG----T 41396
| | ||||| | | | ||||| ||| | | ||| ||||| | || || |
Sbjct 225963 ACGCGTCCGTAGGAGCCCTCGGGCACCTGGACCTGCAGGTCGGTCTTCA-CAACGGCCTT 225905
Query 41397 GCGGTCGTGGCGCGGAACGATGTAGTCGTAGGCGCTTCTCAGGTCCAATCCGGCGGC 41453
|| ||||| || | || | |||||||||||| | |||||||| ||||| ||
Sbjct 225904 GCC-TCGTGCCG--GCACCACAATGTCGTAGGCGCTGCGCAGGTCCACGCCGGCAGC 225851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450764630876280
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