Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_027335.1
Length=145518
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 320 2e-82
seq16 104 2e-17
seq5094 91.5 1e-13
>seq4953
Length=802672
Score = 320 bits (354), Expect = 2e-82
Identities = 1622/2559 (63%), Gaps = 87/2559 (3%)
Strand=Plus/Plus
Query 107067 AATCTTTCAAACCTAAGAGCTCTTGGAGACCCTATTAAGGGGATTGAGGGAGCAGGTAGC 107126
|||||||| |||||||||||| ||| || || ||||| ||| | ||||||| ||
Sbjct 185432 AATCTTTCTAACCTAAGAGCTGCTGGTGATCCCATTAAACACATTCAAGGAGCAGCCAGT 185491
Query 107127 GGTGTTGTTCCTGTTATGAAAATGCTAGAAGACGGTTTCCGGTACGCAAATCAGTTAGGG 107186
|||||| |||| || ||||| | |||||||| ||||| || | || || ||||
Sbjct 185492 GGTGTTCTTCCAGTAATGAAGTTACTAGAAGATAGTTTCACCTATTCCAACCAACTAGGC 185551
Query 107187 CAAAGACAAGGTGCAGGCGCAGTCTATCTAAATGTTTTCCATGCGGATATTATGGACTTT 107246
|||||| | ||||| || | || ||||| | |||||||||| | || || || | ||
Sbjct 185552 CAAAGAAACGGTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTC 185611
Query 107247 TTATCAACTAGAAAAGAAAATGCAGAATCCGCAAA---GCAAATCAAAACACTTTCTTTG 107303
|| | || ||| ||||| || || || ||| | | | || || ||||| |
Sbjct 185612 TTGGGAGTTAAAAAGGAAAACGCCGA---CGAAAAAATCCGAGTAAACACCCTTTCACTT 185668
Query 107304 GGAGTAGTTGTTCCCGATAAATTTTATGAGCTAGCTGAGTCTGGGGATGTAATTCACTTA 107363
|| || ||||| || ||||||||||||||||| ||| | || |||| || || ||
Sbjct 185669 GGTGTGGTTGTGCCAGATAAATTTTATGAGCTCGCTAAAAATGATGATGATATGTACCTA 185728
Query 107364 TTTTCTCCATATGATGTTGCTAAAGAATACGGTGTACCATTCTCATTTGTAGACATTGAT 107423
|| |||||||||||||| || || || || || ||||||| ||| || ||| |
Sbjct 185729 TTCAGTCCATATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCT 185788
Query 107424 TCAGAATACAATAACATGATTCAGAACCCAAATATCAGAAGTAAGGTAATGAAT---GCA 107480
||||||| | || ||| | ||||| || | || |||| || || | ||
Sbjct 185789 AAAGAATACGACAATATGGTCAAGAAC---AAGAACATTTCTAAGAAAAAGATTCGAGCT 185845
Query 107481 CGAGATTTGGAAGAAGAAATTAGCCGTTTACAACAAGAGTCAGGTTACCCATATATTATG 107540
|| || | ||| ||||| | |||||||||| || || || ||||| |||||
Sbjct 185846 CGTGAACTTGAAACCGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATC 185905
Query 107541 AATGTTAGTACTGTAAATAAAGCCAATCCTATTGATGGCAAAATCATTATGAGTAATTTA 107600
|| || || || || | ||||| |||| ||||| || | ||||||||| |
Sbjct 185906 AACATTGACACCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTG 185965
Query 107601 TGCAGTGAAATATTACAGGTACAGACACCATCTAAGCTAAATGATGAACAAGTATACGAA 107660
|| | ||||| | ||||| |||||||| || | | | ||||||||| ||||||
Sbjct 185966 TGTACCGAAATTCTCCAGGTTCAGACACCTTCCATCGTTGACGATGAACAAAACTACGAA 186025
Query 107661 GAGTTAGGTACAGACATTAGCTGTAATTTAGGTTCAATTAACATCCTTAACTTGTTAGAA 107720
||||||| || || | |||||| | || || | |||| | | ||| | | |
Sbjct 186026 CAGTTAGGAACCGATGTCTCATGTAATCTGGGCTCTACTAACGTAGTGAACCTCATGG-- 186083
Query 107721 ACATCTAATGATGTAGTGGCATCAATTGAGACGATGGTAAGAGCTCTAACATATATTACA 107780
|||| || | | |||| |||| | ||||| | ||||||||| | ||||
Sbjct 186084 -CATCACCAGACTTCGGTAAATCAGTTGAAGCCATGGTGAAAGCTCTAACCTTCGTTACC 186142
Query 107781 GATGTGTCAAATATAAAAGCAGTACCTACTATCAAGAATGGTAATGATAAAGCCCATACA 107840
||| ||| || || | || || | | || | || ||||| | || ||
Sbjct 186143 GATCACTCATCAATTAACGTGGTTCCATCAGTTAAACACGGAAATGAACTAAGTCACTCA 186202
Query 107841 ATTGGTTTAGGGGCAATGGGGCTACATGCGTGGTTCGCAAGTAACCAAGTAGAATATGGC 107900
|||||||| || || ||||| || ||| | | || || | || || | | ||||||
Sbjct 186203 ATTGGTTTGGGAGCCATGGGTCTTCATTCATATTTTGCTAAAAATCATATGTACTATGGC 186262
Query 107901 TCACCTGAATCTATTGAAATGACGGATGCC--CTGTTTGAATTAATTAACTATGCTACTT 107958
|||||||| || |||||| | || | || || | || || | ||||| ||
Sbjct 186263 TCACCTGAGTCCATTGAATTTACCAGTACCTACTTTATGCTTT--TAAACTACTGGACCC 186320
Query 107959 TGGTGGCAAGTAACAAGATTGCTAAAGAGCGTGGCACAACATTCCATAACTTTGAGAACT 108018
|| ||| ||| | || ||||| || || || | | |||||||| || || ||
Sbjct 186321 TGAAGGCTTCTAATCAAATGGCTAAGGATCGCGGAAAAGTTTTCCATAATTTCGAAAAAA 186380
Query 108019 CTAAATACGCAGACGGTTCTTACTTTGATGAATA-TGTACCAACACTAAATCAGGAAATC 108077
|||||| || || || ||||| || ||| | || |||||| | | | |||
Sbjct 186381 GTAAATATGCTGATGGATCTTATTTCGATCAGTACACTACCAAGAGTTGGGCTCCAAA-G 186439
Query 108078 TCTAGTAAGGTGGCGGAAGTATTTGATGGAGTGGTACTACCTAATGTAAAAGATTGGGAA 108137
|| ||| || | | |||||||| || | | || | | |||||| ||| |
Sbjct 186440 TCAGATAAAGTAAAATCACTGTTTGATGGCGTCTTTATTCCAACCGAAAAAGACTGGAAC 186499
Query 108138 ACATTAAGAAACAGT--ATTATTGAAGGTGGTCTATACCATCAAAACCGTTTAGCTGTGG 108195
| ||| ||||| | | || || |||||| |||||||| || || | || || |
Sbjct 186500 GCTTTA--AAACAATCAGTCATGGAGTATGGTCTCTACCATCAGAATCGCATGGCCGTAG 186557
Query 108196 CTCCAAATGGTAGTATTGCTTATGTTAATGAGACTACTTCTTCATTGCACCCAATTATCT 108255
|||| |||||| | |||||| || || | || | ||||| || ||| |
Sbjct 186558 CTCCTAATGGTTCAACTGCTTACATTGGGGATGCAACAGCAAGTTTGCATCCGATTGTTC 186617
Query 108256 CTATGATTGAAGAACGTCAAGATGGGAAAACAGGTAAAACTTATTACCCTGCACCCCGGT 108315
| ||||||| ||| ||||| || | || | | ||| ||||| || ||
Sbjct 186618 AAAAAATTGAAGCACGCCAAGAATCAAAGATTGGAACCATTTACTACCCGGCTCCATACC 186677
Query 108316 TATCTGAGAAGACAATTCCATATTACAAGTCAGCGTACAATACAAGTATGATTGACGTAA 108375
| || | | || ||||| || || | ||||| || | || ||| | | ||||
Sbjct 186678 TTTCAAATGACACCATTCCTTACTATGAATCAGCCTATGACACTGACATGCGTAAAGTAA 186737
Query 108376 TCAACGTGTACGCAACAGCACAAAAACATATTGACCAAGGTATGAGTTTAACATTGTTTA 108435
| | || ||||| | || ||||| || |||| ||||| ||||||||||| | ||||
Sbjct 186738 TTGATGTTTACGCTGCCGCTCAAAAGCACGTTGATCAAGGAATGAGTTTAACCCTCTTTA 186797
Query 108436 TGCGCTCAGAGTTACCAGAAAATCTTTATCCTTGG-AAGGTGG-AG-GGTGGCGCTACAT 108492
|||| ||| | ||| | ||||||| ||| ||| ||| || ||| | | |
Sbjct 186798 TGCGTTCAACCATTCCAAAGGGTCTTTATGAATGGAAAGATGGTAGAAGTGACAAAATGT 186857
Query 108493 CCACTCGGGACTTAACTTTATTAAGACATTATGCATGGAAAAAAGGTATAAAAACAATTT 108552
| || | || ||||| | | || ||||||| | |||||||| || ||| || | |
Sbjct 186858 CAACCAGAGATTTAACGATCCTTCGAAATTATGCTTACAAAAAAGGCATTAAATCACTCT 186917
Query 108553 ATTATGTTAGAACATTCACCGAAGAAGACGGAAGCGAAGTAGGGGTTTCAGAGTGTGAAA 108612
|||| || |||| || || || || | | ||||| || | || |||||||
Sbjct 186918 ATTACGTGCGAACCTTTACTGACGATAA---TACTGAAGTTGGTGCCAATGAATGTGAAA 186974
Query 108613 GTTGTACAATTTA------AGGAG-----ATGAGCACATGAAT------TT-----GCAA 108650
| || |||||| ||||| | | |||| ||| || | ||
Sbjct 186975 GCTGCGTAATTTAATCCTTAGGAGGAAATACATGGACATTAATAAAGTCTTAACCGGAAA 187034
Query 108651 G--AAAAG-----TATGAAGGAATTAACTGGAATAAGATTGATGATGTAATTGACCAAGC 108703
| ||||| || ||| |||||||||||| |||||||||| ||||||| ||||
Sbjct 187035 GTCAAAAGGAAACTACAAAGCGATTAACTGGAATTCTATTGATGATGAAATTGACAAAGC 187094
Query 108704 CACATGGAAAAAGCTTACTGAGCAATTTTGGTTGGACACACGTGTCCCTGTAGGTAACGA 108763
|| ||| |||| | || ||||| || ||| | || || | | || || |||||
Sbjct 187095 TACCTGGGAAAAATTAACCGAGCAGTTCTGGCTTGATACTAGAATTCCACTATCAAACGA 187154
Query 108764 TGTTAATGATTGGGCAAAGCTCTC-TGATATGGAGCA-AGAT--TTAATAAATAAAGTGT 108819
| | || || ||| | || | |||| || || | || | | | | || |
Sbjct 187155 TCTAAAGGACTGG----CGTTCACTTGATGATGATCACAAATGGATTGTTGGTCACGTCT 187210
Query 108820 TTGGTGGGTTAACATTACTAGACACAGTTCAATCAGAATCGGGGGTACACTCACTACTTG 108879
|||| |||||||| ||||| || || |||| || || || | | || |
Sbjct 187211 TTGGGGGGTTAACTTTACTGGATACCCTTCAGTCTCAAGACGGAATGGCAGCCCTTCGAA 187270
Query 108880 ATGATGTAAGAACACAGCATGAAGAAGCTGTTTTAAATAACATAGCCTTTATGGAAGCAG 108939
| |||| ||| || |||||| || |||||||||||||| ||||||||| |||
Sbjct 187271 AAGATGCGGTAACGCAACATGAAATTGCGGTTTTAAATAACATTCAGTTTATGGAATCAG 187330
Query 108940 TACACGCTAAAAGTTATTCAACAATTTTTAGCACATTTAATACACCTACAGAGATTGACA 108999
|||| ||||| ||||| || |||| ||| || || || || ||| || |||||
Sbjct 187331 TACATGCTAAGAGTTACTCTTCAATCTTTTCGACTTTGAACACCCCTGATGAAATTGATG 187390
Query 109000 ATATCTTTGAATGGGTAGCTACAAATAAACGTTTACAATATAAAGCTAACA----TTATT 109055
| |||||| | ||| | ||| | || | | ||| | ||| | || | ||||
Sbjct 187391 AGATCTTTCATTGGAGTGACACAGAAGAATTTCTTCAAAACAAAACCAAAAAAATCTATT 187450
Query 109056 AACGATATTTATCGAAACGGTACA-CCACTACAGAAAAAGAGTGCATCCGTACTGTTGGA 109114
|| ||| ||| | ||| ||||| | || || | | || || | | ||
Sbjct 187451 CAC--TATACCACGATGATGGACATCCACTTAAAAAGAAAATTTCAAGTGTCTTTCTTGA 187508
Query 109115 GAGCTTCCTATTTTACTCAGGTTTTTACACACCACTACGCTATTTAGGTGAGGCAAAAAT 109174
| || || || || || || || || || || | | ||| | ||| | || |
Sbjct 187509 AACATTTCTTTTCTATTCTGGATTCTATACCCCTATTTGGTATCTTGGTCATAACGAACT 187568
Query 109175 GGTTAATACAGCCGAAATTATTAAATTAATTATTCGTGACGAGTCTGTACATGGAACCTA 109234
|| || || || || || || |||||||||||||| || || |||||||| ||
Sbjct 187569 TCCAAACGTTGCTGAGATCATCAAGTTGATTATTCGTGACGAATCCGTTCATGGAACTTA 187628
Query 109235 TATCGGCTATAAATACCAGTTAGGGTTTAACCAGTTACCAGAAACTGAACAAAAAGAAAT 109294
|| || ||||||| ||| | ||| || || ||| ||||| |||||||| || |
Sbjct 187629 CATTGGTTATAAATTCCAAGTTCAGTTCAATCAATTAGGAGAAAACGAACAAAACGACTT 187688
Query 109295 GGAACAATGGGT-----AATTGATTTAGCATTTAAATTATGGGAGAACGAAACACAGTAT 109349
|| | ||| | | || | || || | |||| | |||||| | |||||
Sbjct 187689 AAAAGATTGGATGTATAACTTTTTGTACGATCT---TTAT--CAAAACGAAGAAAAGTAT 187743
Query 109350 ACTGCTGAACTATATAGTGAGATTGGTTGGACAAAAGATGTTAATACATTTTTGGAGTAC 109409
||| | || || | | | || ||||| | || ||| || || | |||
Sbjct 187744 ACTCATCTGCTTTACGATCAAGTAGGGTGGACTGACGACGTTTTAACCTTCATTCGTTAC 187803
Query 109410 AATTTAAATAAAGCTCTAGCTAACTTAGG-GATGAACCCTTTATTCCCAACAACAAGTGC 109468
||| || ||||| || || |||| | || || | | ||| ||| || |
Sbjct 187804 AATGCCAACAAAGCATTAATGAATCTAGGACAGGATCCAATGTTCCCCGACACTGAG-GA 187862
Query 109469 AGACGTAAACCCTATTGTAATGAATGGTATCTCTACAACAACTAGTAACCATGACTTCTT 109528
||| || || || ||||| ||||| || || || || |||| |||||||||||||||
Sbjct 187863 AGATGTTAATCCAATTGTTATGAACGGAATTTCAACGGCAACGGTTAACCATGACTTCTT 187922
Query 109529 CTCTCAGGTAGGTAATGGGTACTTACTAGGTAAAGTAGA 109567
||| || || ||||| || ||| ||||| || |||||
Sbjct 187923 CTCACAAGTGGGTAACGGTTACCGTCTAGGAAACGTAGA 187961
>seq16
Length=193047
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 89507 ATTTTAGTACCAACCATTTGCTAACCAGAAAGATTTTGCGTTCTCCCATGAGCCATAGCG 89566
|| |||||||||||| | || | |||||| |||| ||| |||||| ||||| ||
Sbjct 173920 ATCTTAGTACCAACCGTGTGATTGCCAGAATGATTGTGCACCACTCCATGAACCATAACG 173979
Query 89567 ACCTGCTACATACTCATCAGCTACTCGTTCTTGGTTGGCAGGTGAATAGTCACCATTTAA 89626
| ||| || | | ||| |||| |||||||| || |||||||||||||||||||
Sbjct 173980 TGAAGTTACGTATTGGTTAGCAACTCTATCTTGGTTAGCTTGTGAATAGTCACCATTTAA 174039
Query 89627 ATAAGAGGCAGATAATTGGTAACGACCAATATACTGACCATTTGTTGCATCATAAGAACC 89686
|| || |||||||||||| ||| || | |||||||| ||| || || ||
Sbjct 174040 GTATGACTTAGATAATTGGTACTTACCGTAGTAGTTACCATTTGAAGCAGTGTATGAGCC 174099
Query 89687 ACTAGATTCACGTTGTGCAATCCACTCTTTTGCTG 89721
|| ||||||||| | ||||| |||| ||||
Sbjct 174100 ACCTGATTCACGTGAAGTGATCCAAGCTTTGGCTG 174134
Score = 100 bits (110), Expect = 3e-16
Identities = 96/123 (78%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 89585 AGCTACTCGTTCTTGGTTGGCAGGTGAATAGTCACCATTTAAATAAGAGGCAGATAATTG 89644
|||||| ||||||||||| || || || |||||||||||||| || || | |||||||||
Sbjct 100401 AGCTACCCGTTCTTGGTTAGCTGGAGAGTAGTCACCATTTAAGTATGATGAAGATAATTG 100460
Query 89645 GTAACGACCAATATACTGACCATTTGTTGCATCATAAGAACCACTAGATTCACGTTGTGC 89704
||| |||||| |||||||||||| | ||| || || || |||||| ||||||
Sbjct 100461 GTATTTACCAATGTACTGACCATTTCTGGCACTGTATGAGTTACCAGATTCCACTTGTGC 100520
Query 89705 AAT 89707
||
Sbjct 100521 GAT 100523
>seq5094
Length=366253
Score = 91.5 bits (100), Expect = 1e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 102473 GGACGTTTAGCTCAGTTGGTCAGAGCATTCGGCTCATAACCGAACGGTCGCAGGTTCGAG 102532
|||| ||||||||||||||| |||||| ||||||||||||| |||||| |||||||||
Sbjct 1039 GGACCTTTAGCTCAGTTGGTTAGAGCAGACGGCTCATAACCGTCCGGTCGTAGGTTCGAG 1098
Query 102533 ACCTGCAATGTCCAT 102547
||| ||| ||||||
Sbjct 1099 TCCTACAAGGTCCAT 1113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 465499683904080
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