Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_027341.1
Length=130008
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 241 1e-58
>seq4953
Length=802672
Score = 241 bits (266), Expect = 1e-58
Identities = 1103/1719 (64%), Gaps = 63/1719 (4%)
Strand=Plus/Plus
Query 68645 AAATTTCGATTTACAACTTTCATGGGTGCTTATAAATTTTACACACAGTATGCTATGCGC 68704
|| |||| || | | | ||||||| |||||| || || || | || || || |||
Sbjct 185090 AATTTTCACTTCAAATCATTCATGGCTGCTTACAAGTTCTATGCTCAATACGCAATGAAA 185149
Query 68705 ACTACAGATAACAAGTCAATT--CTT-GAACGATATGAAGACCGCATTGCTTTTAATGCC 68761
||| || |||| || || ||| ||| | || ||| || | || | || ||
Sbjct 185150 ACT---GACGACAACTCCATGTACTTAGAAGGCTACATAGATCGGACAGCAATGAACGCA 185206
Query 68762 TTAGTTATGGCTGATGGTGACGAACAATTGGCTCTTAACATTGCGCATGAAATGATTTCA 68821
|| || | ||| |||||||| || |||| ||| | || | || ||||| | |||
Sbjct 185207 TTGTTTCTAGCTAATGGTGACCAAAAATTAGCTATGAATCTAGCTGATGAATTAATTCAT 185266
Query 68822 CAAACCTATCAACCTGCAACACCAACATTCTCTAATGCTGGTAAGTTGCGTGGTGGTAAT 68881
|| | ||||||||| || || || || | || ||||| ||| ||| | ||| |
Sbjct 185267 CAGCGTTTTCAACCTGCCACCCCTACTTTTTTGAACGCTGGAAAGAAACGTCGGGGTGA- 185325
Query 68882 GCTG-TATCATGTTTCCTTTTGAATATTGAAGATAATATGACGTCTATTGGGCGCTCAGT 68940
| || | ||||||||| | | | | ||||| |||| | || || | | |
Sbjct 185326 GTTGATTTCATGTTTCTTACTTCAGACCACCGATAACATGAATACGATCGGTAGAACCAT 185385
Query 68941 AAATTCAGTTCTTCAATTGTCTAAAATGGGTGGTGGAGTTGGAATCAACTTAACTGATAT 69000
||||||| ||||||||| || ||||| ||||| ||||||||||| || | || | |
Sbjct 185386 TAATTCAGCTCTTCAATTATCCAAAATTGGTGGAGGAGTTGGAATTAATCTTTCTAACCT 185445
Query 69001 CCGTCCGTCAGGAGACCCTATCAAGGGTATTGA-GAATATGGCTGATGGAGTTGTTCCAA 69059
| | | || || || || || ||| | | | | | | ||| ||| |||||
Sbjct 185446 AAGAGCTGCTGGTGATCCCATTAAACACATTCAAGGAGCAGCCAG-TGGTGTTCTTCCAG 185504
Query 69060 TCATGAAACT-CTATGAAGATTCATTTTCA--TATGCCAATCAGTTGGGGACAAGAAATG 69116
| ||||| | ||| |||||| | ||||| ||| |||| || | || |||||| |
Sbjct 185505 TAATGAAGTTACTA-GAAGAT--AGTTTCACCTATTCCAACCAACTAGGCCAAAGAAACG 185561
Query 69117 GGGCAGGAGTAACTTATCTCAATGTATTCCATAAAGATATTGTTAAATTCCTCTCTACaa 69176
| || || || |||||| | ||| |||||| || || || ||||| | |
Sbjct 185562 GTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTCTTGGGAGTTA 185621
Query 69177 aaaaaGAAAATGCTGACGAAAAAGTTCGTGTTAAAACTCTTTCTCTCGGTGTTGTAGTTC 69236
|||| ||||| || ||||||||| | || || || || ||||| || ||||| || || |
Sbjct 185622 AAAAGGAAAACGCCGACGAAAAAATCCGAGTAAACACCCTTTCACTTGGTGTGGTTGTGC 185681
Query 69237 CTGATAAATTCTATGAACTCATTGCTAAAGGTGA--ATCA-ATGTATTTGTTTAGCCCTT 69293
| |||||||| ||||| ||| |||||| ||| || | ||||| | || || || |
Sbjct 185682 CAGATAAATTTTATGAGCTC---GCTAAAAATGATGATGATATGTACCTATTCAGTCCAT 185738
Query 69294 ATGATATCTACAATGAGTATGGAAAACTAATGTCTGAAATCAACATCACAGAAATGTATG 69353
||||| | | |||||||||| | | || | | | || | || || |
Sbjct 185739 ATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCTAAAGAATACG 185798
Query 69354 ATGAATTAGTTGAAAACAAAAATATC---AAGAAAGATAAAATCTTTGCTCGTGACCTTG 69410
| | | || | ||||| || || |||||| || || |||||||| ||||
Sbjct 185799 ACAATATGGTCAAGAACAAGAACATTTCTAAGAAA---AAGATTCGAGCTCGTGAACTTG 185855
Query 69411 AAGAAGAAATGTCTAAACTTATTCAAGAATCAGGATATCCATACATCATCAACATTGATA 69470
|| ||||| ||||| |||||||| || ||||||||||| ||||||||||| |
Sbjct 185856 AAACCGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATCAACATTGACA 185915
Query 69471 CAGCAAACCAAGAAAATGCTGTTGACGGTGTAATTAAAATGTCTAACCTTTGTTCTGAAA 69530
| | |||| || ||| | |||||||| ||| ||| ||| || ||| | ||||
Sbjct 185916 CCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTGTGTACCGAAA 185975
Query 69531 TCCTTCAAGTACAATCTCCAT-CAGAATTGAACTCAGACCAAACTTATAAGACTATTGGA 69589
| || || || || | || | || |||| || ||||| || | | | |||
Sbjct 185976 TTCTCCAGGTTCAGACACCTTCCATCGTTGACGATGAACAAAACTACGAACAGT-TAGGA 186034
Query 69590 ACTGACGTATCATGTAACCTTGGTTCAACTAA--TATTACACATCTTATGGAGTCATCTG 69647
|| || || |||||||| || || || ||||| || | || || |||| ||| | |
Sbjct 186035 ACCGATGTCTCATGTAATCTGGGCTCTACTAACGTAGTGAAC--CTCATGGCATCACCAG 186092
Query 69648 ACTTCGGAAGCTCTGTTAGAACAGCAT--TTCGTGCATTAACCTATGTTGCAGATAGCTC 69705
||||||| | || ||| ||| ||| | || |||||| ||| | ||| |||
Sbjct 186093 ACTTCGGTAAATCAGTT-GAA-GCCATGGTGAAAGCTCTAACCTTCGTTACCGATCACTC 186150
Query 69706 TAACATTGAAGAAGTTCCTACTGTTAAGAACGCCAACGA--TAAGTATCACTCAGTAGGG 69763
||| | | ||||| | ||||| ||| || || |||| ||||||| | ||
Sbjct 186151 ATCAATTAACGTGGTTCCATCAGTTAAACACGGAAATGAACTAAG--TCACTCAATTGGT 186208
Query 69764 CTAGGGGCAATGGGACTACATGGATTCCTTGCTAAAAATGGTATTCTCTATGGTTCTCCT 69823
| || || ||||| || ||| || ||||||||||| ||| |||||| || |||
Sbjct 186209 TTGGGAGCCATGGGTCTTCATTCATATTTTGCTAAAAATCATATGTACTATGGCTCACCT 186268
Query 69824 GAATCAATTGAGTTCACAGGTATGTACTTCCAACTCCTAAACTACTGGACTCTATTTGAA 69883
|| || ||||| || || ||| ||||| || ||||||||||||| | ||||
Sbjct 186269 GAGTCCATTGAATTTACCAGTACCTACTTTATGCTTTTAAACTACTGGACCC----TGAA 186324
Query 69884 AG----TAATCGAATTGCTATTGAACGCAATCAATCTTTCTATAACTTTGATAAATCAGA 69939
| ||||| ||| |||| || ||| || |||| |||| || || ||| |
Sbjct 186325 GGCTTCTAATCAAATGGCTAAGGATCGCGGAAAAGTTTTCCATAATTTCGAAAAAAGTAA 186384
Query 69940 ATATGCCAATGGTAAATACTTCAAACGCTA-TCTACCACGTGTTAAATTCAAAAATAATC 69998
|||||| |||| || ||| | | || |||||| | ||| || |||
Sbjct 186385 ATATGCTGATGGATCTTATTTCGATCAGTACACTACCAAGAGTTGGGCTCCAAA------ 186438
Query 69999 TTTCTGATACAGTCAAAGAATTGTTTAAAGATGTTGATATTCCAACTGCACAAGATTGGG 70058
|| |||| ||| ||| | ||||| | | || ||||||||| | | |||| |||
Sbjct 186439 -GTCAGATAAAGTAAAATCACTGTTTGATGGCGTCTTTATTCCAACCGAAAAAGACTGGA 186497
Query 70059 TTGACCTACAAGCTTCAATCGAAGAACATGGTCTATATAACTCTTACCGTTTAGCTGTTG 70118
| || || ||| || || ||||||| || | | || | || || |
Sbjct 186498 ACGCTTTAAAACAATCAGTCATGGAGTATGGTCTCTACCATCAGAATCGCATGGCCGTAG 186557
Query 70119 CACCTACAGGTTCAATTTCTTATGTAAATGAAGCAACTGCTTCTATTCACCCAATCGTAC 70178
| |||| ||||||| | |||| | || ||||| || | | || || || || |
Sbjct 186558 CTCCTAATGGTTCAACTGCTTACATTGGGGATGCAACAGCAAGTTTGCATCCGATTGTTC 186617
Query 70179 AAAAGATTGAGAAGCGTTCAGAAGGTAAACGTGGTGATGTGTTCTATCCAGCACCTTATC 70238
|||| ||||| || |||| || ||| | | ||| || || || || |
Sbjct 186618 AAAAAATTGAAGCACGCCAAGAATCAAAGATTGGAACCATTTACTACCCGGCTCCATACC 186677
Query 70239 TTGCAGAAGGTC----TTCCTTATTATGAATCAGCTTATAATATTGACCAACGTAGAGTT 70294
|| || || | | ||||||| ||||||||||| ||| | | |||| |||| |||
Sbjct 186678 TTTCA-AATGACACCATTCCTTACTATGAATCAGCCTATGACACTGACATGCGTAAAGTA 186736
Query 70295 ATTGATATTTATGCCGAAGCTCAGAAACATGTTGACCAA 70333
|||||| |||| || | ||||| || || ||||| |||
Sbjct 186737 ATTGATGTTTACGCTGCCGCTCAAAAGCACGTTGATCAA 186775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415874741345469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |