Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq4678 104 7e-17
>seq4678
Length=1229792
Score = 104 bits (114), Expect = 7e-17
Identities = 293/440 (67%), Gaps = 25/440 (6%)
Strand=Plus/Minus
Query 443431 TGGCCTTCTTTGCACCGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACG 443490
||||||||||||| | ||| ||||| ||| |||||||||||| ||| || |
Sbjct 1146837 TGGCCTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAATCTGGTGGAGCGCTTTAGCC 1146778
Query 443491 AAATGGTAGTGTACACCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACA 443550
| |||| | |||||||||||||| ||| || | ||||| ||| |||||||||
Sbjct 1146777 AGGAGGTACAGATCACCGAGGCCCGCTGCTTTTATGGCTTCCAGATCGCCATGGAGAACG 1146718
Query 443551 TTCACGCCGAGGTCTACAGTCAGTTGATCAAGACACTAA--TTCCGAACGAAGACGAACA 443608
| || | ||| | |||||| | ||||| |||||| | ||| | || | || ||
Sbjct 1146717 TGCATTCGGAGATGTACAGTGTGCTGATC--GACACTTACATTCGGGACCCACAC---CA 1146663
Query 443609 GCGGTCC-ATCTTCTCATCGTTCAT---GACCACGCCAGGCATCACTGAA----AAGACT 443660
|||| |||| ||| | ||| ||||| ||| | | |||| ||| ||
Sbjct 1146662 GCGGGAATATCTGTTCAATGC-CATTGAGACCATGCCGG----CGGTGAAGCGCAAGGCT 1146608
Query 443661 CGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCT--CAGCTTCGTCGAGCGACTAGTCG 443718
|||||| ||| || | || || || ||| | ||||| | | |
Sbjct 1146607 GACTGGGCCCTGTCCTGGATCT--CTTCCAAGTCGGCCAACTTTGGGGAGCGCATCATTG 1146550
Query 443719 CTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTG 443778
| ||||| | ||||| || | || || |||||||||||| |||||||| |||||| ||
Sbjct 1146549 CGTTTGCCGCCGTCGAGGGCATTTTCTTCAGCGGCAGCTTT-GCCTCCATTTTCTGGCTG 1146491
Query 443779 AAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAG 443838
|| ||||| || || |||| ||| ||||||| || || |||||| || || |||
Sbjct 1146490 AAGAAGCGCGGCCTGATGCCTGGTTTGACCTTCTCCAATGAGCTGATCTCCCGCGATGAG 1146431
Query 443839 GGTTTGCATTGCGACTTCGC 443858
||| |||| || ||||| ||
Sbjct 1146430 GGTCTGCACTGTGACTTTGC 1146411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588231377796745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |