Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_028758.1 Length=35644 Score E Sequences producing significant alignments: (Bits) Value seq4968 80.6 6e-11 >seq4968 Length=441983 Score = 80.6 bits (88), Expect = 6e-11 Identities = 127/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 24032 TGGATGATGATGAAAAGGGGGTAGTTTCAACCGACACCCTTGGTGGAGCGCAACGAGTGC 24091 ||||||| ||||||| |||||| | | |||||||||||||| ||| | ||| | || Sbjct 436810 TGGATGACGATGAAAGGGGGGTCGCTATTACCGACACCCTTGGCGGATCACAAGAAATGA 436869 Query 24092 AGGTTGTAAATGAATCTGGGCTTTATTCTCTAGTTCTTTCAAGCCGTAAACCCGAGTCCA 24151 || | ||||| || || |||||||| || || | ||||| ||| | | ||| Sbjct 436870 CTGTCATCAATGAGAGCGGCCTATATTCTCTCGTCCTGACCAGCCGGAAAGCAGCAGCCA 436929 Query 24152 AGAAATTCAAACGTTGGGTGACACATGAAGTGCTTCCAGCAATCCGTCAAACCGGCACAT 24211 || |||||| ||||| || || |||||||| || |||| | || ||||||| Sbjct 436930 AGCGGTTCAAAAAATGGGTCACGGCGGAGGTGCTTCCTGCCCTCCGGCGCACAGGCACAT 436989 Query 24212 AC 24213 || Sbjct 436990 AC 436991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113932244083052