Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_028878.1 Length=76271 Score E Sequences producing significant alignments: (Bits) Value seq4198 95.1 6e-15 >seq4198 Length=487851 Score = 95.1 bits (104), Expect = 6e-15 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 66123 ATGGGTGCCCCCACAAGGGATCGAACCTTGGACCCGATGATTAAAAGTCACCTGCTCTAC 66182 || |||| | |||||||| |||||||||||||||| ||||||| ||||| ||||||||| Sbjct 116720 ATTGGTGGGCGCACAAGGGCTCGAACCTTGGACCCGCTGATTAAGAGTCAGCTGCTCTAC 116779 Query 66183 CAACTGAGCTAT 66194 |||||||||||| Sbjct 116780 CAACTGAGCTAT 116791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243927115560232