Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_028879.1 Length=43225 Score E Sequences producing significant alignments: (Bits) Value seq4198 91.5 4e-14 >seq4198 Length=487851 Score = 91.5 bits (100), Expect = 4e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 31251 TTTTGGCTGCGCCGGTAGGATTCGAACCTACGAATGCCGGAATCAAAATCCGGTGCCTTA 31310 || |||||| | ||| ||||||||||||| || ||| ||||||||||||||| ||||||| Sbjct 83029 TTCTGGCTGGGGCGGGAGGATTCGAACCTCCGCATGGCGGAATCAAAATCCGCTGCCTTA 82970 Query 31311 CCGCTTGGCGACG 31323 ||||||||| ||| Sbjct 82969 CCGCTTGGCTACG 82957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138189963074054