Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq4953 89.7 5e-13 >seq4953 Length=802672 Score = 89.7 bits (98), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 7/101 (7%) Strand=Plus/Minus Query 27090 CTTAGCTCAGTTGG-TAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAATCCTA 27148 |||||||||||||| ||||||| || ||| ||||| || ||||||| ||||||||||||| Sbjct 309817 CTTAGCTCAGTTGGCTAGAGCGCTTCACTAGTAATGAAGAGGTCGTAGGTTCGAATCCTA 309758 Query 27149 CAGTCGGCACCATAACATGGGGTATTAGTTTAGTGGTAAAA 27189 ||||||| | ||| || | ||||| ||||||| || Sbjct 309757 TAGTCGGC------ATATGCGGAAGTAGTTCAGTGGTAGAA 309723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519793794604560