Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_028911.1
Length=34176
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 158 3e-34
>seq4953
Length=802672
Score = 158 bits (174), Expect = 3e-34
Identities = 225/317 (71%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 21660 CGTGATTCAAGCAAAGCAAAATTCTCAACAATGACCTCAGTCACGAATACTTTCTGGCCT 21719
|||| |||||| | | ||| |||||||||| || || || || | ||| |||||
Sbjct 673000 CGTGGTTCAAGGAGGGTAAAGTTCTCAACAACTACTTCGGTAACATAAACTCGTTGGCCC 673059
Query 21720 TGCGCGTTATCATACGTACGTGTTTGGATATGACCTTCGATGCCAACAAGTGAACCCTTG 21779
||| ||| || || | || || || || |||||||||| |||||||||||||||||
Sbjct 673060 TGCTTGTTCTCGTAATTTCGGGTCTGAATCCGACCTTCGATTCCAACAAGTGAACCCTTA 673119
Query 21780 TGCGTGAAGTTGGCAAAATTCTCGGCAGACTTACGCCAGATGGCACAATTGATGAAGTCA 21839
||| |||||||||||| || || || || || ||||| || |||| |||| |||||||
Sbjct 673120 TGCACGAAGTTGGCAAAGTTTTCAGCTGATTTTCGCCAAATAACACAGTTGACGAAGTCA 673179
Query 21840 GTTTCTCGTTCCCCATTTGCGCTACGAAATTGGCGATCAACAGCAATCGTAAACGAACCA 21899
| ||| || || ||||| | | || | || |||||||| | ||||| | ||||
Sbjct 673180 GCTTCCCGATCACCATTCGAATTGGTGAAACGACGGTCAACAGCTAGGGTAAAAGTACCA 673239
Query 21900 ACCGCTGTTCCGCTTTGCGTATAGCGAAGGCCAACGTCTTTAGTTAATCTGCCTGTTAAA 21959
|| || | || |||| || || || | |||||||| ||||| | || || | |
Sbjct 673240 ACTGCCGCGCCATTTTGGGTGTATCGCAAATCAACGTCTCGTGTTAAGCGTCCAGTAAGA 673299
Query 21960 GCAACTGAATTAAGCAT 21976
| |||| ||||| |||
Sbjct 673300 ACTACTGTATTAATCAT 673316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109234930868596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |