Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_028984.1 Length=30664 Score E Sequences producing significant alignments: (Bits) Value seq4953 95.1 2e-15 >seq4953 Length=802672 Score = 95.1 bits (104), Expect = 2e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27879 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 27938 ||||| || || ||| ||||| ||| | ||| |||||||| || |||||||| ||| Sbjct 673232 TTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTC 673173 Query 27939 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 27998 | || || |||||||| | ||||||||| || || |||| | | || || Sbjct 673172 GTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGT 673113 Query 27999 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAG 28058 | ||| | || || ||||| ||||||||||| ||||| || ||| | || || || Sbjct 673112 TCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAA 673053 Query 28059 CGTGTTTACGTCACAGAAGTTGTTG 28083 || ||||| || || ||||| |||| Sbjct 673052 CGAGTTTATGTTACCGAAGTAGTTG 673028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97997216965892