Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_029026.1
Length=130952
Score E
Sequences producing significant alignments: (Bits) Value
seq16 100 2e-16
>seq16
Length=193047
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 121790 ATTTTAGTACCAACCATTTGCTAACCAGAAAGATTTTGCGTTCTCCCATGAGCCATAGCG 121849
|| |||||||||||| | || | |||||| |||| ||| |||||| ||||| ||
Sbjct 173920 ATCTTAGTACCAACCGTGTGATTGCCAGAATGATTGTGCACCACTCCATGAACCATAACG 173979
Query 121850 ACCTGCTACATACTCATCAGCTACTCGTTCTTGGTTGGCAGGTGAATAGTCACCATTTAA 121909
| ||| || | | ||| |||| |||||||| || |||||||||||||||||||
Sbjct 173980 TGAAGTTACGTATTGGTTAGCAACTCTATCTTGGTTAGCTTGTGAATAGTCACCATTTAA 174039
Query 121910 ATAAGAGGCAGATAGTTGGTAACGACCAATATACTGACCATTTGTTGCATCATAAGAACC 121969
|| || ||||| |||||| ||| || | |||||||| ||| || || ||
Sbjct 174040 GTATGACTTAGATAATTGGTACTTACCGTAGTAGTTACCATTTGAAGCAGTGTATGAGCC 174099
Query 121970 ACTAGATTCACGTTGTGCAATCCACTCTTTTGCTG 122004
|| ||||||||| | ||||| |||| ||||
Sbjct 174100 ACCTGATTCACGTGAAGTGATCCAAGCTTTGGCTG 174134
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 121868 AGCTACTCGTTCTTGGTTGGCAGGTGAATAGTCACCATTTAAATAAGAGGCAGATAGTTG 121927
|||||| ||||||||||| || || || |||||||||||||| || || | ||||| |||
Sbjct 100401 AGCTACCCGTTCTTGGTTAGCTGGAGAGTAGTCACCATTTAAGTATGATGAAGATAATTG 100460
Query 121928 GTAACGACCAATATACTGACCATTTGTTGCATCATAAGAACCACTAGATTCACGTTGTGC 121987
||| |||||| |||||||||||| | ||| || || || |||||| ||||||
Sbjct 100461 GTATTTACCAATGTACTGACCATTTCTGGCACTGTATGAGTTACCAGATTCCACTTGTGC 100520
Query 121988 AAT 121990
||
Sbjct 100521 GAT 100523
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418895352074413
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |