Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_029030.1 Length=31075 Score E Sequences producing significant alignments: (Bits) Value seq4953 109 1e-19 >seq4953 Length=802672 Score = 109 bits (120), Expect = 1e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 28704 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 28763 ||||| || || ||| ||||| ||| | ||| |||||||| || |||||||| ||| Sbjct 673232 TTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTC 673173 Query 28764 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 28823 | || || |||||||| | ||||||||| || || |||| | | || || Sbjct 673172 GTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGT 673113 Query 28824 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAGCAAGGACAG 28883 | ||| | || || ||||| ||||||||||| ||||| || ||| |||| || || Sbjct 673112 TCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAA 673053 Query 28884 CGTGTTTATGTTACAGAAGTTGTTG 28908 || ||||||||||| ||||| |||| Sbjct 673052 CGAGTTTATGTTACCGAAGTAGTTG 673028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99312336673754