Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_029030.1
Length=31075
Score E
Sequences producing significant alignments: (Bits) Value
seq4953 109 1e-19
>seq4953
Length=802672
Score = 109 bits (120), Expect = 1e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 28704 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 28763
||||| || || ||| ||||| ||| | ||| |||||||| || |||||||| |||
Sbjct 673232 TTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTC 673173
Query 28764 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 28823
| || || |||||||| | ||||||||| || || |||| | | || ||
Sbjct 673172 GTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGT 673113
Query 28824 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAGCAAGGACAG 28883
| ||| | || || ||||| ||||||||||| ||||| || ||| |||| || ||
Sbjct 673112 TCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAA 673053
Query 28884 CGTGTTTATGTTACAGAAGTTGTTG 28908
|| ||||||||||| ||||| ||||
Sbjct 673052 CGAGTTTATGTTACCGAAGTAGTTG 673028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 99312336673754
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |