Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_029073.1
Length=141298
Score E
Sequences producing significant alignments: (Bits) Value
seq5094 134 1e-26
>seq5094
Length=366253
Score = 134 bits (148), Expect = 1e-26
Identities = 125/159 (79%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 5935 GGTGATAAAGTTAAATTGTTCGGATTCGGTAATTTTGAAGTTCGTGAGCGTGCAGCTCGT 5994
||||| || || ||||| |||| || |||||||| ||||| ||| | ||||| ||||||
Sbjct 182222 GGTGAGAAGGTACAATTGATCGGTTTTGGTAATTTCGAAGTACGTAATCGTGCCGCTCGT 182281
Query 5995 AAAGGTCGGAATCCTCAAACTGGAGAAGAAATTGAAATTCCAGCAACTAAATCCCCTGCT 6054
||||| || || |||||||| || | ||||||| |||| || |||| |||| |||||
Sbjct 182282 AAAGGACGTAACCCTCAAACAGGTGCAGAAATTCAAATCCCTGCAAGTAAAGTACCTGCC 182341
Query 6055 TTCAAACCTGCAAAAGCGTTAAAAGATGCGGTTAAATAA 6093
|| ||||||| || || ||||| || || |||||||||
Sbjct 182342 TTTAAACCTGGTAAGGCTTTAAAGGAAGCTGTTAAATAA 182380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451996551704880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |