Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq5094 134 1e-26 >seq5094 Length=366253 Score = 134 bits (148), Expect = 1e-26 Identities = 125/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 5935 GGTGATAAAGTTAAATTGTTCGGATTCGGTAATTTTGAAGTTCGTGAGCGTGCAGCTCGT 5994 ||||| || || ||||| |||| || |||||||| ||||| ||| | ||||| |||||| Sbjct 182222 GGTGAGAAGGTACAATTGATCGGTTTTGGTAATTTCGAAGTACGTAATCGTGCCGCTCGT 182281 Query 5995 AAAGGTCGGAATCCTCAAACTGGAGAAGAAATTGAAATTCCAGCAACTAAATCCCCTGCT 6054 ||||| || || |||||||| || | ||||||| |||| || |||| |||| ||||| Sbjct 182282 AAAGGACGTAACCCTCAAACAGGTGCAGAAATTCAAATCCCTGCAAGTAAAGTACCTGCC 182341 Query 6055 TTCAAACCTGCAAAAGCGTTAAAAGATGCGGTTAAATAA 6093 || ||||||| || || ||||| || || ||||||||| Sbjct 182342 TTTAAACCTGGTAAGGCTTTAAAGGAAGCTGTTAAATAA 182380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451996551704880