Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq4761 86.0 5e-12 >seq4761 Length=1439414 Score = 86.0 bits (94), Expect = 5e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 118465 TTCAGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCA 118524 ||||| || || | ||||| | ||||||||||| || || || ||||| | || ||| Sbjct 1350224 TTCAGCGGATCCACATGATTTAGGTAGACATGAGCGTCGCCCATGGTATGAACAAAGTCA 1350283 Query 118525 CCAGGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACA 118584 ||||| | || ||||||| || || ||||||| || | || ||| ||| | Sbjct 1350284 CCAGGCTTCAGACCTGTCACATGGGCTATCATGTGGGTAAGCAGGGCGTAAGAGGCGATG 1350343 Query 118585 TTAAAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCC 118644 || || || || |||||||||||||| || |||||||||| || || || | ||| Sbjct 1350344 TTGAATGGCACGCCCAGACCCATGTCAGCGCTCCTCTGGTACAGCTGACAGGACAACTCG 1350403 Query 118645 CC 118646 || Sbjct 1350404 CC 1350405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414450830567524