Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_030931.1
Length=41871
Score E
Sequences producing significant alignments: (Bits) Value
seq4583 120 8e-23
>seq4583
Length=779074
Score = 120 bits (132), Expect = 8e-23
Identities = 258/380 (68%), Gaps = 7/380 (2%)
Strand=Plus/Plus
Query 27277 CTGCGCCTGGCGATGCTGCAGGCCCAGCTGGCGCGCCTGCCGGCATCCGGCCACGTTCTG 27336
||||| ||||| ||| ||||| || |||||| |||||| | || ||| |||||
Sbjct 71925 CTGCGGCTGGCTATGTTGCAGACCACGCTGGCAGAATACCCGGCAACAGGGCACATTCTG 71984
Query 27337 CACTTCATCGACTGGGCGAAGATCGAGCTGACCAAGGACACCCTGGGCCGCTACATCCTC 27396
|| | |||||||| | || || |||||||||||| || |||| || | ||
Sbjct 71985 AACCCAACTGACTGGGCCAGCATTGAACTGACCAAGGACGGTGTGAGCCGGTATGTGTTC 72044
Query 27397 GCCAACCCGCTGGGCCTGGCCGGCCCGCTGCTGTGGGGCCTGCCGGTGGTTGCCACTGAA 27456
||||| || ||||| |||| |||||| | |||||||||||||| || | || ||
Sbjct 72045 GCCAATCCTATGGGCATGGCTGGCCCGGTTCTGTGGGGCCTGCCTGTAGCTGAATCT--- 72101
Query 27457 ATCGCCGCGTTCCAGGGCAAGTTCCTGACTGGTGCGTTCCAGACCGGC-GCGCAGATCTT 27515
| ||| | |||||||||||| |||| || || || ||| | || |||||| | ||
Sbjct 72102 CTGGCCATGGCGCAGGGCAAGTTCATGACCGGGGCCTT-CAGCCTTGCGGCGCAGCTGTT 72160
Query 27516 CGATCGCGAAGACGCCAACGTGGTGATCTCCACCGAGAACGCCGACGACTTCGAGAAGAA 27575
|| || || ||||| | || || |||||||| || || |||||| ||
Sbjct 72161 TGACCGTGAGGACGCTACAGTCTCCATTTCCACCGAAGACCGGGATAACTTCGTAAAAGG 72220
Query 27576 CATGATCTCGATCCGTTGC-GAAGAGCGCCTGGCGCTGGCCGTGAAGCGCCCCGAGGCGT 27634
|||| | | || | | || ||||||||| |||||| || | || || ||||
Sbjct 72221 CATGGTGACCATTC-TGGCGGAAGAGCGCACAACGCTGGTTGTTTACCGTCCGCAGGCCA 72279
Query 27635 TCATCTACGGCACCTTCACC 27654
| ||| ||||| |||||||
Sbjct 72280 TTATCAACGGCGACTTCACC 72299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133857427588786
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |