Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq4765 309 4e-79
>seq4765
Length=3541379
Score = 309 bits (342), Expect = 4e-79
Identities = 1204/1874 (64%), Gaps = 30/1874 (2%)
Strand=Plus/Minus
Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424
||||| || | |||||||| |||| | || || || || || || || || |||||
Sbjct 3010803 TTCTTGTCGACGGTGAACTGTATGGCATTGGCAGCCGGCTTCGTGCGGAGGTAATACATC 3010744
Query 75425 CCAGTTTTTAGACCCAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACT 75483
|| ||||| || || || || ||| ||| || || ||| ||| || ||| ||| |
Sbjct 3010743 CCGGTTTTAAGGCC-AGCCTTCCACGAGTAAAAGTGTATGGATGTCAGCTTGCCATAGTT 3010685
Query 75484 CGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGC 75543
|| || || | |||||| || | ||| ||||| |||||||| || || || | ||| ||
Sbjct 3010684 GGGCTCAGCCACATGAATGTTGAACGATTGACTCTGATCGATAAACGCACCGCGATCTGC 3010625
Query 75544 CGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGAT 75603
|||||||| || ||| || || || ||||||| || ||| | | | | |
Sbjct 3010624 GGCCATTTTAATGGTGGATTTCACAGAGATCTCCCAAACCGTCTTGTACA---GATCGCG 3010568
Query 75604 ATCAT-CTGGAAGAT----TTG-TATTTTGAATGGATCCGCCATCAGATATAATTGTATT 75657
| ||| |||| || | | |||| || || || || | || || || ||
Sbjct 3010567 AACATTCTGGGGAATGGCCTCGATATTCTGGATAGAGCCACGGCTGGAAATGATCTGGTT 3010508
Query 75658 CTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAAC 75717
||| || ||||||| |||||| | ||| |||| | | | | || ||| | || ||
Sbjct 3010507 CTTCATGTCATCATCCCACAAGTCCAGCTCAGTTAGATCCCGCAATAGGTGATGGTTGAC 3010448
Query 75718 AATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCAC 75777
| || ||||| || || | || | || || || ||||| |||| || || || |
Sbjct 3010447 CACCTGGAATTCGCCGGAGAGAACGCGGCGTGTATAGATATTCGTGGTGTACGGCTCGAA 3010388
Query 75778 AGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAA 75837
||||| ||||| |||| || || ||||| || || || ||||| || ||||| | |
Sbjct 3010387 GGATTCGTTGTTGCCCATTATCTGGGCAGTGGATGCCGTGGGCATGGGGGCCACGAGCAG 3010328
Query 75838 ACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 75897
| ||||| | || ||| | |||| || || || | | ||| ||||| || |
Sbjct 3010327 AGAGTTTCTAACGCCGTGTTTCTTGATCGATTCCTTCAGCTTTGCCCAGTCCCAGAGGTT 3010268
Query 75898 TGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATT 75957
| ||||| ||||| | ||||| || || ||||| ||||| | || |
Sbjct 3010267 CGTGGGTACCTTGTCCCACATGTCGTACTGGAGGATTCCCTTGCTCACGGGGCTGCCCTC 3010208
Query 75958 ATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTA 76017
|| ||||| || | || || | || ||||| ||||| || || | || || ||
Sbjct 3010207 GTAGGTTTCATACGGGCCTTCGACCTGGGCCAGTTCACAACTGGCTTCCAGGGCTCCATA 3010148
Query 76018 ATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATA 76077
||| || ||||| || |||| | ||| || ||| || || || | || |
Sbjct 3010147 ATATATCGTTTCAAAGATCTGTTGATTCAGGAGACCCGCCTCCTCGCTTTCGTAGGGG-A 3010089
Query 76078 ATGTAAA-AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTC 76136
|| | | ||||| || ||||| || ||||||||||| ||||| ||||| || | ||| |
Sbjct 3010088 ATCTCATCAGAATCAAGGCATCGGCGAGTCCCTGAACGCCAATGCCAATGGGGCGATGCC 3010029
Query 76137 TCTTATTGGAAATTTC--AGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATT 76194
|| |||| | ||||| || || || | || ||||| || || || ||||| || ||
Sbjct 3010028 TCATATTCG--ATTTCCTGGCCTCCGGCAGGGGATAATAGTTGATGTCAATAATCTTGTT 3009971
Query 76195 GAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----TTTTC 76250
||||| || | || || || ||||| || || |||||| | |||||
Sbjct 3009970 CAGATTCTTGGCCACAGTCTTGGTGACCTCCTTCAGCTTCTTAAAATCGTACGTCTTTTC 3009911
Query 76251 CATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG 76310
| |||||||||| || ||||| || || || || || || ||||| | ||| | |
Sbjct 3009910 GGGC-GTCACAAACATGTTGAGAGCGATGGACGCCAGGTTGCAGACGGCGATCTCGTCGG 3009852
Query 76311 CATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTT 76370
|| || | | || || ||||| ||||| || |||||||| || || | ||| |
Sbjct 3009851 GCGAGGAGTACTCGACGATTTCTGTGCACAGATTGCTGCACTTGATGGTGCCCACATTCT 3009792
Query 76371 GTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAA 76430
| || |||||||| |||| || | ||||| | || | ||||| | ||||| || |
Sbjct 3009791 GCTGATTGCTCTTCCTGTTGCACGCATCCTTGAAGAGCATGTACGGATTGCCAGTCTCCA 3009732
Query 76431 TCTGTGATTCGATAATAGATTTCCAGA-CGACTCTAGCTTTTATTAT-AGATTTGTATCG 76488
||| | ||||| || | ||| | |||| ||| || | | | |||| | |
Sbjct 3009731 CCTGCGCCTCGATGATGGCGAACCACAGGGACT-GAGCCTTAACTGTCCGATTGG---CC 3009676
Query 76489 CTTCTCTC--TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546
||| ||| || |||| || | | ||||| || || ||||| ||||| | |
Sbjct 3009675 TTTCCCTCGGCCTCGTATTTAAGGTACAGCTTCTCAAACTCGTCGCCCCACACATCCTGC 3009616
Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606
| || ||||| | | ||| ||||| | ||||| | ||| ||| || || |||
Sbjct 3009615 AGGCCGGGACACTTGTGCGGGCACATTAGGGACCAGTTTTCATTCGCCTCGACGCGCTTC 3009556
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
||||||||||| |||||||| || ||| |||||||| || | | | || || ||
Sbjct 3009555 ATAAAGAGATCGGGTATCCAGAGGGCATAGAATAGATCGCGAGCACGATTCTCCTCCTTG 3009496
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| || |||||||| || || | |||||| | | ||| || ||||| || || | |||
Sbjct 3009495 CCGGTGTTCTTTTTCAGTTCCAAGAACTCGAAGACATCCGAGTGCCAGGGCTCCAAATAG 3009436
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | |||| || || || || ||||| || | || | || || ||
Sbjct 3009435 ATGGCAAAGGCACCGGGCCGCTTGCCGCCACCCTGGTCCACGTACCGAGCCACATTGTTG 3009376
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
| |||| || ||| |||| | ||| || || || |||||||| ||| | || || |
Sbjct 3009375 AAGACTCGCAGCATGGGAACGAGGCCATTGGAGGTGCCATTTGTGCCACATATGGAAGTG 3009316
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
|| ||||| || | | | ||||| || || || ||| || ||||| |
Sbjct 3009315 CCCTTGGCACGGATGCAATGGACATTCAGGCCAATGCCGCCCGCCGACTTGGAGATCATG 3009256
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
|||||| ||| || | | | | ||||| || || ||| ||||| | || ||
Sbjct 3009255 GCACAGTGTTCCACCGACTTAAAAATGCCTTCGATCGAATCCGATGTCATGGTCAGGAGG 3009196
Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
|| ||| || | || | | || | || |||| || || || || ||
Sbjct 3009195 AAGCAGGACGAGAGCTGCGGCCGGTTCGTGGCAGCGGCGAACAGGGTGGGCGAGGCGTGT 3009136
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086
||||| | || || | | ||||||||| || | | | || || || || |
Sbjct 3009135 GTGAAGAAGCGCTCTGACAACAAATTGTATGTCTCCACAGCGGCATCGATGTCTTCACCA 3009076
Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146
|| ||||| | || || ||||||| ||| ||||| || || || || ||||| |||
Sbjct 3009075 TGGATTCCAATCGCCACGCGCATCAGCATGTGCTGCGGCCGCTCGGCAATCTTACCGTTT 3009016
Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206
| |||| ||| || || |||| || || |||||||| || || || ||||||
Sbjct 3009015 CTCTTCAGCAAATACGAACGCTCCAGGGTCTTGAAACCAAAGTAATTATACCCAAAGTCG 3008956
Query 77207 CTTTCGTAAATAAT 77220
| |||||||| ||
Sbjct 3008955 CGATCGTAAATTAT 3008942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712888585053120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |