Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_031091.1
Length=43277
Score E
Sequences producing significant alignments: (Bits) Value
seq1772 147 6e-31
>seq1772
Length=1414
Score = 147 bits (162), Expect = 6e-31
Identities = 258/376 (69%), Gaps = 0/376 (0%)
Strand=Plus/Plus
Query 9295 AGCGGCGGCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGC 9354
|||| || | ||||||||| | | ||| |||| ||||| | |||| | ||||
Sbjct 18 AGCGCCGAAGGCGCTGGAGCTTGGCCGAGAAGATGGCCATGGTGAGGGAGACCTACGAGC 77
Query 9355 CAGGACACAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTC 9414
| || ||||| || ||||||| || ||| ||||| ||||| |||| || || || |
Sbjct 78 CCGGGATGAGCGTGTCCCTGGTGGCGCGCCGCCACGGCATCAATCCCAACCAGCTGTTCC 137
Query 9415 ACTGGCGCAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGG 9474
| ||||||||||| | ||| ||| ||| | || || ||||||| || | ||||
Sbjct 138 AATGGCGCAAGCTGGAGAAGGTCGGTGCCTTGACCGCTGTTGGCGCCGGCGAGCCGGTGG 197
Query 9475 TGCCTGCGTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGG 9534
|||| || ||| | || |||| || || || |||||| |||| |||| |
Sbjct 198 TGCCGGCAGGCGAACTCGACGCAGCGCGCAAGCGCATCGCTGAGCTGGAACGCTTGCTCG 257
Query 9535 GCAAGAAGACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAA 9594
| |||||| |||| ||| | ||||| || || |||||| | || ||| ||||
Sbjct 258 GGCGCAAGACGCTGGAGAACGAGATTCTCAAGGAAGCGGTGGAGGTGGCGCGCGAACGAA 317
Query 9595 AATGGATTGCGCACTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATG 9654
| |||||||||| |||||||| |||||| ||||||| | ||||| | || | |
Sbjct 318 AGTGGATTGCGCGCTCACCCTCGTTGCCCGGGGACGAGCTGTGAAGCCCGTTTGCCAGGC 377
Query 9655 TCTCGGTGTGGCGCGC 9670
|| ||||||||||||
Sbjct 378 CCTGGGTGTGGCGCGC 393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138356352915438
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |