Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq4761 91.5 2e-13 >seq4761 Length=1439414 Score = 91.5 bits (100), Expect = 2e-13 Identities = 87/111 (78%), Gaps = 4/111 (4%) Strand=Plus/Minus Query 200834 GCGAGCTTTCCTGTCAGCTGTATCAGCGTAGCGCTGATATGTTTTTAGGCGTGCCGTTCA 200893 ||||| | |||||||||||||| ||| | |||||||| ||| | | |||||||| |||| Sbjct 1350404 GCGAGTTGTCCTGTCAGCTGTACCAGAGGAGCGCTGACATGGGTCTGGGCGTGCCATTCA 1350345 Query 200894 ACATTGCATCATACGCACTACTGATTCACATGGTAGCCCA----ACAGGTC 200940 |||| || || ||||| || || | |||||| ||||||| ||||||| Sbjct 1350344 ACATCGCCTCTTACGCCCTGCTTACCCACATGATAGCCCATGTGACAGGTC 1350294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783309659328000