Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_031274.1 Length=50509 Score E Sequences producing significant alignments: (Bits) Value seq4968 80.6 9e-11 >seq4968 Length=441983 Score = 80.6 bits (88), Expect = 9e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 45664 TGGCGTTCCGTACAGGATTCGAACCTGTAACCCACAGCTTAGAAGGCTGTAGCTCTATCC 45723 ||||| || | | ||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct 267865 TGGCGCGCCCTGCTGGATTCGAACCAGCGACCCACAGCTTAGAAGGCTGTTGCTCTATCC 267806 Query 45724 TATTGAGCTAACGG 45737 | |||||||| || Sbjct 267805 AACTGAGCTAAGGG 267792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 161497340086382