Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4810 114 3e-20
seq4644 113 1e-19
seq4863 111 4e-19
seq4765 109 1e-18
>seq4810
Length=1195048
Score = 114 bits (126), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||| | ||| ||||| || |||||||||||||||| || || | || ||
Sbjct 316971 AGGACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTGCGTCCGTCC 316912
Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010
|| || ||||| ||||| ||||| || | ||||||||| | | || || ||||| |
Sbjct 316911 TCCAGCTGCTTT--CCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGT 316854
Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070
| || || || ||||| |||| | | |||| || ||| || ||||| || || |
Sbjct 316853 CCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGG 316794
Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || | |||||| ||||||| ||||||
Sbjct 316793 TCTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 316760
Score = 105 bits (116), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 5/213 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || |||||||||||||||| | || | || || || |
Sbjct 316510 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCCTCCA 316452
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| ||||| ||||| || | ||||||||| | | || || ||||| || ||
Sbjct 316451 GCTGCTTT--CCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 316394
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || ||||| |||| | |||| || ||| || ||||| || ||||| ||
Sbjct 316393 GATCTTGGCCTTGACGTTCTCGATTGTGTCGGAGGGCTCGACCTCAAGGGTGATAGTCTT 316334
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
||| || | |||||| ||||||| ||||| ||
Sbjct 316333 GCCGGTCAAAGTCTTGACGAAGATTTGCATGTT 316301
Score = 104 bits (114), Expect = 5e-17
Identities = 151/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||||| || ||||||||||| || | | ||| | ||||| || |
Sbjct 316738 CAAG-TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGACCATCCTCCA 316680
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| ||||| ||||| || | ||||||||| | | || || ||||| || ||
Sbjct 316679 GCTGCTTT--CCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 316622
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || ||||| |||| | | | || || ||| || ||||| || || || ||
Sbjct 316621 GATCTTGGCCTTGACGTTCTCAATGGTATCGGAGGGCTCGACCTCAAGGGTGATGGTCTT 316562
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || | |||||| ||||||| ||||||
Sbjct 316561 GCCGGTCAAAGTCTTGACGAAGATCTGCAT 316532
>seq4644
Length=1132839
Score = 113 bits (124), Expect = 1e-19
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | || ||||| ||||| || ||||||||||| |||| | || |
Sbjct 752754 GAGACGGAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 752695
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || ||||||||||| | | |||||| || | | ||||| ||
Sbjct 752694 TCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGTATTCCCTC 752635
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| ||||| ||||| || ||| |||| | | |||| || ||| ||||| |||||
Sbjct 752634 CTTGTCTTGGATTTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGT 752575
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || || |||||||| |||| |||||||
Sbjct 752574 GATGGTCTTTCCAGTCAGGGTCTTCACAAAGATCTGCATT 752535
Score = 105 bits (116), Expect = 2e-17
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || ||||||||||| || | | || | ||||| || |
Sbjct 752058 CAAG-TGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGGCCATCCTCCA 752000
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || |||||||| || || | |||||| || | | |||||| ||||| || || |
Sbjct 751999 GCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGA 751940
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT-TTTG 152075
| || || ||| |||| | | |||| || ||| ||||| ||||| || || |||
Sbjct 751939 TCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACTTCCAGAGTGATGGTCTTTC 751880
Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || ||||||||||| |||| |||||||
Sbjct 751879 CGAGTAAGAGTCTTCACAAAGATCTGCATT 751850
Score = 98.7 bits (108), Expect = 2e-15
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| | || | || ||||| |
Sbjct 752286 CAAG-TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTCTTCCA 752228
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| | | |||||| || | | |||||| ||||| || || |
Sbjct 752227 GCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTCCTGGA 752168
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || ||| |||| | | |||| || ||| || || | || || || || |
Sbjct 752167 TCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGTCTTTC 752108
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105
| || |||||||||||||||| |||||||
Sbjct 752107 CGGTAAGAGTCTTCACGAAGATCTGCATT 752079
Score = 93.3 bits (102), Expect = 1e-13
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| || || ||||| || ||||||||||| |||| | || | || ||
Sbjct 752520 GAGCACCAAATGCAGGGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGTCCGTC 752461
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || ||||||||||| | | |||||| || | | |||||| ||||| ||
Sbjct 752460 CTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATTCCCTCCTTGTC 752401
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| |||| | | |||| || ||| || || | || || ||
Sbjct 752400 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGGATGGCTCCACCTCCAAGGTGATGGT 752341
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || |||||||| |||| |||||||
Sbjct 752340 CTTTCCGGTCAGGGTCTTCACAAAGATCTGCATT 752307
>seq4863
Length=1240122
Score = 111 bits (122), Expect = 4e-19
Identities = 150/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| |||| | ||| | ||||| || |
Sbjct 1064085 CAAG-TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATCCTCCA 1064027
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||| ||||| || | |||||| || | | || || ||||| || || |
Sbjct 1064026 GCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGA 1063967
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| |||| | | |||| ||| ||| || || || || || || ||||
Sbjct 1063966 TCTTGGCCTTGACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAGGGTGATGGTCTTGC 1063907
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || |||||||||| ||||||
Sbjct 1063906 CGGTGAGGGTTTTCACGAAGATCTGCAT 1063879
>seq4765
Length=3541379
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|||||||| || || ||||| || || | | || | |||||||| || || ||
Sbjct 2921430 GTAGACTCCTTCTGAATGTTATAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 2921489
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| || | |||||| || | | |||||||| || || ||||| || ||||
Sbjct 2921490 GCAAAGATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 2921549
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | |||| || || || |||||||| || || ||||||||||| |||
Sbjct 2921550 ACATTTTCGATAGTGTCCGACGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTC 2921609
Query 152088 TTCACGAAGACCTGCATTTT 152107
|||||||||| |||||| ||
Sbjct 2921610 TTCACGAAGATCTGCATCTT 2921629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153744798905611
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